dbCAN Logo

PROTEIN: Rep_614_c_1_1425

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_614_c_1_1425.pdb
Genome ID:
Rep_614
Protein ID:
Rep_614_c_1_1425

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MASTCNRPYS   NKLGDHKIKL   IWLALYYGLA   IHLPGSYSFM   GKLFRAKAIR   YALCRRIFLK 60
CGKNVNIEHG   CNFGSGLEIE   IGDNSGMGID   CTLPSNVKIG   DNVMMGPKCF   FLAFNHAYKD 120
KSKSIQSQGY   TDKKIIRIGN   DVWIGREVLF   TPGRIVKDGT   VIAARTVVCK   DFASYSVIGG 180
NPARLIATRE 190
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F514-F1-model_v4 17 190 1 169 0.8694 0.9435
AF-K0EU34-F1-model_v4 16 189 16 178 0.7671 0.8817
AF-Q54ED9-F1-model_v4 17 190 16 178 0.7668 0.8872
AF-P0ACD2-F1-model_v4 13 190 16 179 0.765 0.8848
AF-H9L4A1-F1-model_v4 13 190 16 179 0.7605 0.8839
AF-Q552S7-F1-model_v4 16 190 26 186 0.7454 0.8934
AF-Q8ZRA8-F1-model_v4 13 189 20 183 0.7446 0.8625
AF-Q32J39-F1-model_v4 16 189 23 183 0.7443 0.8773
AF-Q86A05-F1-model_v4 17 190 26 193 0.7423 0.867
AF-A0A0H3GKK7-F1-model_v4 16 190 23 184 0.7393 0.8775
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4K001-F1-model_v4 GT1 38 189 28 228 0.6354 0.8727
D8DUW3 GT2 13 190 240 411 0.5372 0.8242
AF-A0A1Z4N893-F1-model_v4 GT2 11 190 306 470 0.5267 0.8843
A0A9W4F949 GT2 11 190 307 471 0.5241 0.8807
AF-A0A517YPZ3-F1-model_v4 GT2 17 190 325 485 0.5203 0.8859
AF-A0A518C0G7-F1-model_v4 GT2 13 190 349 513 0.5125 0.8631
AF-A0A6P1YLS6-F1-model_v4 GT4 15 190 24 187 0.5106 0.884
A0A7M2X016 GT2 14 190 354 517 0.5104 0.8721
AF-A0A402CU73-F1-model_v4 GT2 17 190 344 520 0.4792 0.7688
AF-A0A0D3V768-F1-model_v4 GT2 21 190 7 179 0.472 0.7647
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
Q4K001 GT1 38 189 28 228 0.6354 0.8727
D8DUW3 GT2 13 190 240 411 0.5372 0.8242
A0A9W4F949 GT2 11 190 307 471 0.5241 0.8807
A0A517YPZ3 GT2 17 190 325 485 0.5203 0.8859
A0A518C0G7 GT2 13 190 349 513 0.5125 0.8631
A0A6P1YLS6 GT4 15 190 24 187 0.5106 0.884
A0A7M2X016 GT2 14 190 354 517 0.5104 0.8721
QBX94987.1 GT2 38 190 322 522 0.4859 0.8816
A0A402CU73 GT2 17 190 344 520 0.4792 0.7688
A0A0S2M2B5 GT4 39 190 361 559 0.4685 0.8752
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3ect-assembly1.cif.gz_A 13 190 12 176 0.7715 0.8724
3srt-assembly2.cif.gz_B 16 190 24 186 0.7548 0.8874
6ag8-assembly1.cif.gz_C 16 189 22 182 0.7474 0.8786
3igj-assembly1.cif.gz_A 19 190 23 185 0.7376 0.8679
4egg-assembly1.cif.gz_A 16 190 23 185 0.7374 0.8707
4dcl-assembly1.cif.gz_A 16 190 23 185 0.736 0.8691
5u2k-assembly1.cif.gz_A 16 190 23 185 0.7333 0.8709
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD3-F1-model_v4 11 190 15 179 0.7656 0.8798
AF-P0ACD2-F1-model_v4 13 190 16 179 0.765 0.8848
AF-P28266-F1-model_v4 16 187 24 183 0.7462 0.8838
AF-Q552S7-F1-model_v4 16 190 26 186 0.7454 0.8934
AF-P37515-F1-model_v4 17 189 24 184 0.7429 0.8776
AF-Q86A05-F1-model_v4 17 190 26 193 0.7423 0.867
AF-P08632-F1-model_v4 19 190 25 187 0.7384 0.8749
AF-Q54UU2-F1-model_v4 17 190 27 187 0.7376 0.8869
AF-Q4L967-F1-model_v4 16 190 23 185 0.7297 0.8707
AF-P40892-F1-model_v4 9 190 2 185 0.7297 0.7916
Download Full SwissProt Results