PROTEIN: Rep_556_c_7_19
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Protein File & Metadata
Source:
Rep_556_c_7_19.pdb
Genome ID:
Protein ID:
Rep_556_c_7_19
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Protein Sequence
MKTKTLFSLF ICCLLSLSSV QAENWWDKVP LLVYTPRYFG ANAFPIPELL GGKLSSRWEV 60 ELRGEYHTMP GDKTKDIYAR LYIPIAKGRA GVTVQGVIQE WYETSPEVRD ERHAVEVKQP 120 IPCHGDAIFG FHYQVLTNEK WMDVIVSANL KTASGGRLCD ARYTDAASYW FDCNVGRTLW 180 KNPEETLSVR AQGMVGFYCW MTNSLQNRQD DAFCYGLGLQ GTCRNFTLDV DYSGFRGYRG 240 EGDKPMIFRS KLNYEIKKNI VSFRYKHGLQ DILYDTFSLA YIRCF 285
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQ33-F1-model_v4 | 56 | 285 | 21 | 230 | 0.6961 |
0.854 |
| AF-P0A1U8-F1-model_v4 | 51 | 285 | 13 | 227 | 0.6891 |
0.8229 |
| AF-Q9HUY6-F1-model_v4 | 47 | 285 | 54 | 258 | 0.6307 |
0.8388 |
| AF-Q9I2X6-F1-model_v4 | 52 | 285 | 58 | 336 | 0.6187 |
0.8251 |
| AF-Q9HVK5-F1-model_v4 | 52 | 285 | 141 | 617 | 0.4237 |
0.6944 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5o68-assembly2.cif.gz_F | 48 | 285 | 9 | 254 | 0.7175 |
0.8242 |
| 5o68-assembly3.cif.gz_I | 48 | 285 | 9 | 256 | 0.7157 |
0.8252 |
| 5o68-assembly4.cif.gz_L | 48 | 285 | 9 | 258 | 0.7154 |
0.8277 |
| 5o68-assembly4.cif.gz_J | 48 | 285 | 10 | 268 | 0.7073 |
0.8331 |
| 5o68-assembly3.cif.gz_G | 48 | 285 | 10 | 271 | 0.7044 |
0.8341 |
| 5o68-assembly2.cif.gz_D | 48 | 285 | 10 | 271 | 0.7033 |
0.8327 |
| 5o68-assembly1.cif.gz_A | 48 | 285 | 10 | 272 | 0.702 |
0.8327 |
| 5o68-assembly2.cif.gz_E | 48 | 285 | 9 | 273 | 0.7016 |
0.8337 |
| 5o68-assembly4.cif.gz_K | 48 | 285 | 9 | 272 | 0.7001 |
0.8296 |
| 5o68-assembly1.cif.gz_B | 48 | 285 | 9 | 274 | 0.6992 |
0.8322 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0A1U8-F1-model_v4 | 51 | 285 | 13 | 227 | 0.6891 |
0.8229 |
| AF-P0A1U9-F1-model_v4 | 55 | 285 | 20 | 227 | 0.6823 |
0.8399 |
| AF-P45386-F1-model_v4 | 10 | 285 | 1174 | 1847 | 0.3922 |
0.7112 |