PROTEIN: Rep_556_c_7_10
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Protein File & Metadata
Source:
Rep_556_c_7_10.pdb
Genome ID:
Protein ID:
Rep_556_c_7_10
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Protein Sequence
MKANDMKIVI NPEYSFLTDF INDLPENFSS EGEIIYNERN VLKRYQVQGV DMIVKSFKVP 60 ILVNRIAYAF FRKSKACRSY EYALEILKRG GNTPAPIAYI EEYKNGLLNR SYYISIFDAR 120 ATTIREYMDG SILDAEVMWR SFVRFTINIH RSGILHIDYS PGNILMEMNP DGSYLFSLID 180 INRLCFKKVS EEEALCNFDR LALSVDVSTR LAEIYAEECS LDRNETVRKV NECSDRFFLK 240 RTIKESAKQI KREKGKRKIF LGPLQQYFFL RWTRMLFMNG HKDNCLYKKE RELYLTYIKP 300 KDERQVLNRR YRYEF 315
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD48-F1-model_v4 | 5 | 302 | 1 | 244 | 0.6966 |
0.8034 |
| AF-Q9HUF8-F1-model_v4 | 6 | 242 | 1 | 252 | 0.6885 |
0.8283 |
| AF-Q06995-F1-model_v4 | 7 | 301 | 1 | 265 | 0.6504 |
0.7303 |
| AF-O86224-F1-model_v4 | 4 | 221 | 7 | 241 | 0.6471 |
0.8221 |
| AF-P25741-F1-model_v4 | 7 | 301 | 1 | 265 | 0.6432 |
0.7229 |
| AF-Q329M7-F1-model_v4 | 1 | 301 | 1 | 268 | 0.6409 |
0.717 |
| AF-Q5U452-F1-model_v4 | 1 | 269 | 6 | 244 | 0.6388 |
0.7534 |
| AF-Q99PW4-F1-model_v4 | 1 | 271 | 6 | 244 | 0.6372 |
0.7516 |
| AF-D3ZCD7-F1-model_v4 | 1 | 269 | 6 | 244 | 0.6355 |
0.7498 |
| AF-F1QB90-F1-model_v4 | 3 | 268 | 6 | 231 | 0.635 |
0.7659 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A412PJX9 | GT2 | 1 | 246 | 250 | 493 | 0.5861 |
0.9198 |
| AF-A0A5P8NYZ5-F1-model_v4 | GT2 | 1 | 304 | 280 | 535 | 0.5809 |
0.8977 |
| AF-A0A4P8MJU8-F1-model_v4 | GT2 | 1 | 235 | 250 | 484 | 0.5709 |
0.923 |
| AF-A0A4Q0U493-F1-model_v4 | GT2 | 1 | 235 | 250 | 484 | 0.5707 |
0.9227 |
| AF-A0A2K9H403-F1-model_v4 | GT2 | 1 | 235 | 250 | 484 | 0.5687 |
0.919 |
| UOZ96246.1 | GT30 | 4 | 221 | 129 | 360 | 0.5322 |
0.8192 |
| AF-A0A517MPQ2-F1-model_v4 | GT2 | 4 | 301 | 22 | 435 | 0.5316 |
0.7111 |
| A0A8E6BA73 | GT4 | 4 | 315 | 389 | 841 | 0.5106 |
0.7737 |
| AF-A0A1U9NDM3-F1-model_v4 | GT4 | 4 | 310 | 383 | 650 | 0.4679 |
0.7336 |
| AF-A0A5J6P981-F1-model_v4 | GT4 | 5 | 310 | 386 | 651 | 0.4669 |
0.7385 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A412PJX9 | GT2 | 1 | 246 | 250 | 493 | 0.5861 |
0.9198 |
| A0A5P8NYZ5 | GT2 | 1 | 304 | 280 | 535 | 0.5809 |
0.8977 |
| UOZ96246.1 | GT30 | 4 | 221 | 129 | 360 | 0.5322 |
0.8192 |
| A0A517MPQ2 | GT2 | 4 | 301 | 22 | 435 | 0.5316 |
0.7111 |
| A0A8E6BA73 | GT4 | 4 | 315 | 389 | 841 | 0.5106 |
0.7737 |
| A0A5J6NW48 | GT4 | 5 | 310 | 388 | 653 | 0.4653 |
0.736 |
| AZP69834.1 | GT4 | 1 | 303 | 366 | 642 | 0.4651 |
0.7056 |
| A0A0K0ST99 | GT4 | 1 | 303 | 119 | 648 | 0.4627 |
0.6533 |
| A0A1X9N346 | GT2 | 1 | 310 | 328 | 611 | 0.4501 |
0.7495 |
| WFE69707.1 | GT30 | 4 | 221 | 436 | 676 | 0.4324 |
0.8325 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7szc-assembly2.cif.gz_C | 1 | 236 | 1 | 223 | 0.6474 |
0.777 |
| 7szc-assembly1.cif.gz_A | 1 | 236 | 1 | 229 | 0.6387 |
0.7586 |
| 7sza-assembly2.cif.gz_C | 1 | 236 | 1 | 225 | 0.6385 |
0.7641 |
| 7szb-assembly2.cif.gz_C | 1 | 236 | 1 | 226 | 0.6381 |
0.7621 |
| 6dfl-assembly1.cif.gz_A | 7 | 308 | 1 | 241 | 0.617 |
0.7215 |
| 4ww9-assembly1.cif.gz_A | 22 | 276 | 6 | 238 | 0.5683 |
0.6772 |
| 4ww7-assembly1.cif.gz_A | 22 | 310 | 6 | 237 | 0.5683 |
0.6767 |
| 4ww5-assembly1.cif.gz_A | 23 | 310 | 5 | 236 | 0.5677 |
0.6764 |
| 4wwa-assembly1.cif.gz_A | 23 | 233 | 6 | 224 | 0.5673 |
0.7165 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3BWM9-F1-model_v4 | 1 | 221 | 14 | 247 | 0.656 |
0.8346 |
| AF-B0RTE2-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6552 |
0.8335 |
| AF-Q5H410-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6546 |
0.8328 |
| AF-Q8PNH3-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6543 |
0.8325 |
| AF-Q8PBX3-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6541 |
0.8322 |
| AF-Q2P6W5-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6541 |
0.8322 |
| AF-B2SLU1-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6538 |
0.8319 |
| AF-B2FR65-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6532 |
0.8312 |
| AF-Q4URM8-F1-model_v4 | 1 | 221 | 14 | 247 | 0.6531 |
0.831 |
| AF-Q4QNS8-F1-model_v4 | 4 | 221 | 7 | 241 | 0.6523 |
0.8284 |