PROTEIN: Rep_556_c_18_23
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Protein File & Metadata
Source:
Rep_556_c_18_23.pdb
Genome ID:
Protein ID:
Rep_556_c_18_23
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Protein Sequence
MVMKLKRRNK LSLVLLFLAG LSAWGQSDAQ FDHYLSLREK NRQTGDNKGY WAVSLSGGVS 60 LYQGESDGGT SKIDQLSPYG KLTVARWFSS VWGIRWEAGG GTQKNSHVMM KEPDTNGKFY 120 FVDSYLTLIT NLMNWGTCKR SNRPVGVYLF LGGGGAWTPA RDQKKQEFSP AAIGGVDLNI 180 RMTDYWSFSL GIEGTIVKDN FNGYTGGRKF EGYAGVTAGL TYRFP 225
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FA01-F1-model_v4 | 47 | 224 | 21 | 175 | 0.6777 |
0.8725 |
| AF-Q8ZQG1-F1-model_v4 | 47 | 224 | 21 | 172 | 0.6228 |
0.8139 |
| AF-Q0P7R0-F1-model_v4 | 47 | 224 | 23 | 214 | 0.6117 |
0.7634 |
| AF-Q8ZM87-F1-model_v4 | 47 | 224 | 25 | 178 | 0.6113 |
0.8009 |
| AF-P0A917-F1-model_v4 | 47 | 225 | 22 | 171 | 0.5839 |
0.7702 |
| AF-Q7CQV8-F1-model_v4 | 46 | 225 | 22 | 171 | 0.5774 |
0.7611 |
| AF-P13794-F1-model_v4 | 46 | 225 | 25 | 185 | 0.5067 |
0.8532 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5H8HE79 | GT4 | 49 | 223 | 23 | 174 | 0.5931 |
0.7781 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5H8HE79 | GT4 | 49 | 223 | 23 | 174 | 0.5931 |
0.7781 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O51058-F1-model_v4 | 8 | 225 | 1 | 211 | 0.6867 |
0.7369 |
| AF-Q9ZE71-F1-model_v4 | 10 | 225 | 3 | 242 | 0.6433 |
0.7215 |
| AF-Q52866-F1-model_v4 | 31 | 224 | 37 | 211 | 0.6407 |
0.806 |
| AF-Q68XU9-F1-model_v4 | 34 | 224 | 32 | 240 | 0.6384 |
0.7863 |
| AF-Q4UNE7-F1-model_v4 | 36 | 224 | 37 | 244 | 0.6326 |
0.7938 |
| AF-Q92JG2-F1-model_v4 | 36 | 224 | 37 | 244 | 0.6316 |
0.7917 |
| AF-Q1RKL1-F1-model_v4 | 37 | 224 | 40 | 245 | 0.6269 |
0.7917 |
| AF-Q68Y05-F1-model_v4 | 45 | 224 | 23 | 225 | 0.6233 |
0.7884 |
| AF-O83715-F1-model_v4 | 33 | 224 | 40 | 219 | 0.6222 |
0.7759 |
| AF-Q9ZCC9-F1-model_v4 | 47 | 224 | 25 | 222 | 0.6193 |
0.7877 |