PROTEIN: Rep_556_c_0_115
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Protein File & Metadata
Source:
Rep_556_c_0_115.pdb
Genome ID:
Protein ID:
Rep_556_c_0_115
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Protein Sequence
MKKNLVSLAA MALLLSACGT GESRSFKTDR FGIDVDNRGY ITGMWNLTRE SRNFSPADQP 60 SPLLSLYDED LKCYYYPQKA HYSGGKYRLE YENGSVATVA LDEKTKYFKL KLESLEPRNG 120 IDGIQWGNYY TNITNLLGEM IGVARDTSAA VGYAIGALAL DDNTIGGESR YTSETGPSGY 180 IAHTPDPVNH PLPLTLHEGQ QFTMGGDGIN DVAFYNRKEP YFRILYGTTA FVDCNGRINI 240 RYHSRDRRKG KMIYSPEGNP IFQNNEPNHM MRQDVPGVDF IGSSIALWGS PDSTALMEVI 300 QDIVLNEGLP YPTFQGKWVK DPTNFMPDIC TYGGLMDSVA SYAKQMGLKV IHTYDQPFLH 360 ADRGNGGFID GPNHEKKRYH FTDKDLSTRE YADLLAKDGL ILGRTSISNS MAPGTKDCSP 420 VPSDSICILH RRFLTADLNE TDTLVYIDDP THLEEIACWE GNSKELNMVK IGKELIHYLG 480 VTKEKPYRLM KVTRGYWGTE AVAHAKGNAV DKLQPAVGGA YAGLIPNLEL QDELARHYAD 540 ICKNSGLGMF DYDGQEFYFH TGFGSYSVKR FFRNMFAQAK DYGLPDIRFT GATLSEGSWH 600 YQSIWNVGGG LNIYDVKKRV WGSTTSQGKD LRDVTYANFF PSSFGGNFPI TEKSTVEDFE 660 HIEATAVGYG CTYAFKIGQK DVESCPQKYA IFNVIRTWEE ARRADAFPTY IKKMLQNPAL 720 SWRLEEKADN SGWILYQMEN GERVRSFDLR SSLR 754
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132P9P9-F1-model_v4 | 19 | 752 | 17 | 741 | 0.5499 |
0.5817 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7S7NTK5-F1-model_v4 | GH0 | 14 | 754 | 1 | 665 | 0.5429 |
0.6071 |
| AF-A0A0N7J6L4-F1-model_v4 | GH97 | 12 | 754 | 11 | 669 | 0.5408 |
0.5959 |
| AF-A6KY14-F1-model_v4 | GH97 | 12 | 754 | 11 | 670 | 0.5402 |
0.594 |
| AF-F4A243-F1-model_v4 | GH36 | 27 | 754 | 1 | 631 | 0.5308 |
0.6169 |
| AF-A0A5B9EEU3-F1-model_v4 | GH0 | 11 | 754 | 33 | 741 | 0.5302 |
0.5751 |
| AF-A0A089M928-F1-model_v4 | GH36 | 27 | 747 | 1 | 690 | 0.529 |
0.5736 |
| AF-A0A1G7L360-F1-model_v4 | GH31 | 11 | 754 | 41 | 710 | 0.5285 |
0.6044 |
| AF-A0A7G9P4N8-F1-model_v4 | GH0 | 19 | 754 | 32 | 705 | 0.528 |
0.601 |
| AF-A0A143PLW8-F1-model_v4 | GH0 | 17 | 754 | 39 | 707 | 0.5258 |
0.6011 |
| AF-A9AY84-F1-model_v4 | GH31 | 32 | 752 | 1 | 616 | 0.5251 |
0.5918 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G3V291 | GH36 | 15 | 747 | 1 | 616 | 0.6082 |
0.6831 |
| QGM92380.1 | GH36 | 24 | 749 | 1 | 632 | 0.5867 |
0.6503 |
| A0A8J8MPP2 | GH36 | 29 | 754 | 1 | 638 | 0.5813 |
0.6431 |
| QXT61872.1 | GH36 | 21 | 751 | 1 | 701 | 0.5664 |
0.6024 |
| A0A518AMI7 | GH97 | 1 | 754 | 19 | 622 | 0.5623 |
0.6445 |
| WAL72821.1 | GH36 | 42 | 750 | 1 | 624 | 0.5582 |
0.6274 |
| A0A7G9P174 | GH36 | 19 | 754 | 22 | 686 | 0.5524 |
0.636 |
| A0A2H5AUM1 | GH36 | 19 | 752 | 29 | 719 | 0.5506 |
0.6062 |
| F4A243 | GH36 | 27 | 754 | 1 | 631 | 0.5308 |
0.6169 |
| A0A089M928 | GH36 | 27 | 747 | 1 | 690 | 0.529 |
0.5736 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6gta-assembly1.cif.gz_A | 43 | 748 | 1 | 531 | 0.5696 |
0.6786 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.