PROTEIN: Rep_556_c_0_108
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_556_c_0_108.pdb
Genome ID:
Protein ID:
Rep_556_c_0_108
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MTEYKKVLSL CAASLLLFSC TTEKTWDFNT DYFSIGVNDK GYITSMKNTT VSPAREFSPT 60 DKPSPLMSLY DSEKRVFYTP QSAVFNDATQ CFTLEYPNGS VAEVALQPNS KYFKLTLNSL 120 EPRNGIDAIQ WGSYYTNITN LLGEIIGVAR DTSDVVNYSI GVLALDDNTL GGTPDIEGDA 180 APFQYIIHTP DKERYPLPDS LHEGQVFTLG GNGISDVAFY ANKEPYYRIM YGNAALVDSL 240 GRIYLNYQSR DRSKPRQVFY SLIPNMPANI PNHIDVEPIP GVDFIGSSVA LWGSPDSTAL 300 LDVIQHIVLS EGLPYPTVKG KWIKDPAAFS PDVMTSGNRY DSIISYTARL GFPAIHAYDQ 360 GFLRPDRANE GYLDGKAQTK KPFRFNSGNK SHREFADLAA SQGLMLGRVC ITNSLAPGTK 420 DASPVPSDSL CYQQKRTLMK SITAQDTLIV VDDPKYLEEI ASWEGHCKEL NIIKIGKELI 480 HYLGVSETAP YTLQNVTRGY WGTQATSHEA NEPAYKLQVT INYGYDGLIP NLALQDKIAE 540 YYAEVAAHSG LTLYDFDGQE FLFNNGHGYY SAKRFFRKLF ERAKELDVPY IRFSGATLSE 600 GSWHYQSVWN VGGGRNLYDI DTREWGSATS QGKDLRDVTY SNYYPVSFGG NFAIKDTSTV 660 EQYEHVQAIS VGYGATYFLA INQEDVESCP QKDEIFKAIR TWEDARRANA FPRQLKKLLR 720 DPSYDWRLEA GVDGNTWTLY RLVNGDKVES FVLRRAEGY 759
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0G3V291-F1-model_v4 | GH36 | 18 | 751 | 1 | 616 | 0.6094 |
0.6862 |
| QGM92380.1 | GH36 | 26 | 753 | 1 | 632 | 0.5836 |
0.6489 |
| AF-H9UCS6-F1-model_v4 | GH31 | 20 | 759 | 4 | 665 | 0.5598 |
0.6163 |
| H9UCS6 | GH31 | 20 | 759 | 4 | 665 | 0.5598 |
0.6163 |
| AF-A0A2S0L091-F1-model_v4 | GH36 | 40 | 754 | 1 | 587 | 0.5545 |
0.6357 |
| AF-A0A385SZU0-F1-model_v4 | GH36 | 19 | 756 | 22 | 728 | 0.551 |
0.5928 |
| AF-Q8A3V3-F1-model_v4 | GH36 | 20 | 755 | 23 | 720 | 0.548 |
0.5945 |
| AF-A6KYC8-F1-model_v4 | GH36 | 21 | 755 | 24 | 721 | 0.5475 |
0.5945 |
| AF-A0A5P9HLG7-F1-model_v4 | GH31 | 29 | 759 | 5 | 673 | 0.5457 |
0.599 |
| AF-A0A5C0ZHI3-F1-model_v4 | GH0 | 20 | 759 | 21 | 700 | 0.5337 |
0.6051 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G3V291 | GH36 | 18 | 751 | 1 | 616 | 0.6094 |
0.6862 |
| QGM92380.1 | GH36 | 26 | 753 | 1 | 632 | 0.5836 |
0.6489 |
| A0A5B8VTX0 | GH36 | 9 | 744 | 6 | 554 | 0.5816 |
0.6894 |
| A0A8J8MPP2 | GH36 | 31 | 756 | 1 | 635 | 0.5805 |
0.6463 |
| A0A7M3S995 | GH36 | 18 | 754 | 1 | 685 | 0.5781 |
0.6213 |
| BDZ47805.1 | GH36 | 14 | 756 | 2 | 694 | 0.577 |
0.6182 |
| A0A1H1TF09 | GH36 | 29 | 744 | 7 | 544 | 0.5687 |
0.686 |
| A0A9N7L376 | GH36 | 20 | 743 | 19 | 544 | 0.5668 |
0.6971 |
| A0A7M3S9K0 | GH36 | 55 | 743 | 1 | 516 | 0.5649 |
0.6897 |
| QXT61872.1 | GH36 | 23 | 755 | 1 | 701 | 0.5624 |
0.6001 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6qep-assembly1.cif.gz_A | 23 | 755 | 1 | 706 | 0.429 |
0.5844 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.