PROTEIN: Rep_553_c_52_28
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Protein File & Metadata
Source:
Rep_553_c_52_28.pdb
Genome ID:
Protein ID:
Rep_553_c_52_28
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Protein Sequence
MNVKLLLVIV LYNQKLQNTK TYSSLLVNTD EDVFVYDNSP YPQHVATEVI MPKWKYVSDV 60 TNGGISKAYN LAGRYALLNG YDWMLFLDQD TIFSKGILDE YKDVISRYKE IKLIAAPMKI 120 GEKIYLSPVK AYFYMARPAH SVPEGKMSLN KYFLINSGLA VDVEAFHEVG GYNEKVKLDF 180 SDYEFIRRFK KHYSYFYVLK SISFQSFSNL VESNEQKLHR FDLFCDSLKN CEKKTWLDNI 240 GFFSIVIKRM LALIWQTRSL KPMISVITNY FE 272
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z882-F1-model_v4 | 1 | 272 | 1 | 272 | 0.8292 |
0.8569 |
| AF-Q8ZQV3-F1-model_v4 | 2 | 272 | 1 | 288 | 0.7879 |
0.8503 |
| AF-Q32EG0-F1-model_v4 | 3 | 272 | 1 | 278 | 0.7801 |
0.8223 |
| AF-Q32EF9-F1-model_v4 | 1 | 272 | 1 | 292 | 0.7796 |
0.8441 |
| AF-Q9I4K5-F1-model_v4 | 1 | 272 | 2 | 290 | 0.7494 |
0.8358 |
| AF-P9WMX3-F1-model_v4 | 1 | 272 | 1 | 291 | 0.744 |
0.8106 |
| AF-K0EYK6-F1-model_v4 | 2 | 259 | 8 | 291 | 0.7337 |
0.8297 |
| AF-K0EZA2-F1-model_v4 | 10 | 259 | 1 | 272 | 0.7301 |
0.8191 |
| AF-A0A133CI93-F1-model_v4 | 1 | 244 | 4 | 266 | 0.7287 |
0.8221 |
| AF-P9WMY3-F1-model_v4 | 1 | 259 | 1 | 294 | 0.723 |
0.8247 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QIK54166.1 | GT2 | 3 | 271 | 1 | 267 | 0.9542 |
0.9726 |
| AF-A0A447V0G1-F1-model_v4 | GT2 | 3 | 272 | 1 | 275 | 0.936 |
0.9604 |
| AF-U3GKA5-F1-model_v4 | GT2 | 3 | 272 | 1 | 275 | 0.9357 |
0.96 |
| A0A3Y1QSQ1 | GT2 | 3 | 272 | 1 | 275 | 0.9349 |
0.9594 |
| AF-A0A0A8J6U3-F1-model_v4 | GT2 | 3 | 272 | 1 | 275 | 0.9344 |
0.959 |
| E5CDJ2 | GT2 | 3 | 272 | 1 | 268 | 0.9312 |
0.9697 |
| SDT31735.1 | GT2 | 1 | 272 | 2 | 279 | 0.9286 |
0.9608 |
| UKT63274.1 | GT2 | 1 | 272 | 2 | 284 | 0.926 |
0.96 |
| WDF59112.1 | GT2 | 1 | 272 | 1 | 281 | 0.9258 |
0.9543 |
| AF-A0A1J1DXN1-F1-model_v4 | GT2 | 1 | 272 | 1 | 277 | 0.9231 |
0.9496 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QIK54166.1 | GT2 | 3 | 271 | 1 | 267 | 0.9542 |
0.9726 |
| A0A3Y1QSQ1 | GT2 | 3 | 272 | 1 | 275 | 0.9349 |
0.9594 |
| E5CDJ2 | GT2 | 3 | 272 | 1 | 268 | 0.9312 |
0.9697 |
| SDT31735.1 | GT2 | 1 | 272 | 2 | 279 | 0.9286 |
0.9608 |
| UKT63274.1 | GT2 | 1 | 272 | 2 | 284 | 0.926 |
0.96 |
| WDF59112.1 | GT2 | 1 | 272 | 1 | 281 | 0.9258 |
0.9543 |
| UYM55190.1 | GT2 | 1 | 272 | 1 | 281 | 0.9224 |
0.9537 |
| A0A0Q4N5Q1 | GT2 | 2 | 272 | 1 | 279 | 0.9202 |
0.9553 |
| WHR51328.1 | GT2 | 3 | 272 | 1 | 271 | 0.9198 |
0.9415 |
| B9M568 | GT2 | 1 | 272 | 1 | 280 | 0.9182 |
0.9555 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6p61-assembly2.cif.gz_B | 2 | 207 | 2 | 191 | 0.6808 |
0.8207 |
| 6p61-assembly3.cif.gz_C | 2 | 208 | 2 | 190 | 0.6774 |
0.8186 |
| 1h7q-assembly1.cif.gz_A | 3 | 238 | 1 | 233 | 0.6682 |
0.7494 |
| 1h7l-assembly1.cif.gz_A | 3 | 238 | 1 | 232 | 0.6674 |
0.7504 |
| 1qgs-assembly1.cif.gz_A | 3 | 238 | 1 | 231 | 0.6656 |
0.7493 |
| 5hea-assembly1.cif.gz_A | 2 | 272 | 1 | 263 | 0.6615 |
0.7139 |
| 6h4m-assembly4.cif.gz_Q | 2 | 272 | 1 | 273 | 0.6459 |
0.7172 |
| 6h4m-assembly2.cif.gz_I | 2 | 272 | 1 | 274 | 0.644 |
0.7158 |
| 6hnq-assembly1.cif.gz_C | 2 | 272 | 1 | 271 | 0.644 |
0.7122 |
| 6h4m-assembly2.cif.gz_H | 2 | 272 | 1 | 277 | 0.6427 |
0.7177 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37782-F1-model_v4 | 1 | 272 | 1 | 283 | 0.802 |
0.8581 |
| AF-A0R5Z2-F1-model_v4 | 1 | 272 | 3 | 294 | 0.7486 |
0.8129 |
| AF-P9WMX3-F1-model_v4 | 1 | 272 | 1 | 291 | 0.744 |
0.8106 |
| AF-P9WMX2-F1-model_v4 | 1 | 272 | 1 | 291 | 0.7425 |
0.8093 |
| AF-D4GU63-F1-model_v4 | 1 | 272 | 15 | 298 | 0.7411 |
0.8082 |
| AF-P9WMY3-F1-model_v4 | 1 | 259 | 1 | 294 | 0.723 |
0.8247 |
| AF-P36667-F1-model_v4 | 4 | 238 | 1 | 250 | 0.7149 |
0.8328 |
| AF-P9WMY2-F1-model_v4 | 1 | 259 | 1 | 294 | 0.7078 |
0.8077 |
| AF-Q4KXC9-F1-model_v4 | 1 | 249 | 5 | 254 | 0.6984 |
0.7588 |
| AF-D4GYG7-F1-model_v4 | 1 | 272 | 4 | 303 | 0.6952 |
0.7564 |