PROTEIN: Rep_553_c_4_80
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Protein File & Metadata
Source:
Rep_553_c_4_80.pdb
Genome ID:
Protein ID:
Rep_553_c_4_80
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Protein Sequence
MLKLKASYGI VGNDDIGGER RWVYESSIVA GNNWNYGSAG ANGGASIHVG DVENLSVSWE 60 EAKKMNVGVE FSLFNKLRIQ ADYFHEKREG IFLQRAGLPA IVGLSVIPYT NIGETKNQGF 120 DGTVEYLQKV GEVFLTGRAN FTYNKNELLN NDEPDWQYKY QNRTGKPFGS GGYLQPFGLV 180 ALGLFESQEE IDYSPKQTYG EYRVGDIKYQ DINGDGKIDS QDEIAMGYTN LPEIVYGFGA 240 TAQWKNWDIN VFFQGVGRVS LFLDGSSIKS PFSSGNMERA AINEDVYGNV WRPGNTDEQN 300 AEAIYPRLSW SGAAGSSNNG QTSSWWLRNG SFLRLKNFEV GYTLSKGLMN KTFIKSLRFY 360 LSGNNLLTFS QFKLWDPEKG NGDGSGYPPN RVVTIGFNAN F 401
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223HUM7 | GH35 | 1 | 401 | 1153 | 1571 | 0.5157 |
0.8261 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223HUM7 | GH35 | 1 | 401 | 1153 | 1571 | 0.5157 |
0.8261 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6z8i-assembly1.cif.gz_B | 1 | 401 | 406 | 807 | 0.59 |
0.7926 |
| 8aa4-assembly1.cif.gz_B | 1 | 401 | 494 | 871 | 0.5893 |
0.8571 |
| 8a9y-assembly1.cif.gz_I | 1 | 401 | 532 | 903 | 0.5842 |
0.8724 |
| 6zlt-assembly1.cif.gz_B-2 | 1 | 401 | 532 | 933 | 0.5788 |
0.8129 |
| 6sml-assembly1.cif.gz_B | 1 | 401 | 547 | 911 | 0.5518 |
0.8396 |
| 6slj-assembly1.cif.gz_A | 1 | 401 | 535 | 898 | 0.5409 |
0.8207 |
| 6sli-assembly1.cif.gz_B | 1 | 401 | 535 | 900 | 0.5394 |
0.8147 |
| 6sm3-assembly1.cif.gz_B | 1 | 401 | 535 | 903 | 0.5389 |
0.8096 |
| 6sln-assembly1.cif.gz_B | 1 | 401 | 535 | 902 | 0.5382 |
0.8091 |
| 5fq8-assembly1.cif.gz_D | 1 | 401 | 543 | 941 | 0.5035 |
0.7124 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KM18-F1-model_v4 | 1 | 401 | 597 | 990 | 0.5755 |
0.8361 |
| AF-T2KMI3-F1-model_v4 | 1 | 401 | 621 | 1038 | 0.5622 |
0.814 |
| AF-T2KPJ3-F1-model_v4 | 1 | 401 | 609 | 1001 | 0.5594 |
0.8174 |
| AF-Q8A1G1-F1-model_v4 | 1 | 401 | 628 | 1003 | 0.5133 |
0.7816 |