PROTEIN: Rep_553_c_34_33
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Protein File & Metadata
Source:
Rep_553_c_34_33.pdb
Genome ID:
Protein ID:
Rep_553_c_34_33
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Detailed structural information will appear here after analysis...
Protein Sequence
MSVDKIDNKR IAKNTGALYI RMLLVMLVTL YTSRVILETL GVEDFGIYNI VGGFVSILSF 60 FSSSLSNVTQ RYLNIKLGER DIIGANHIFC QSIVLFAFFS FLLLIVGETI GLWFVENKLV 120 IPAERQYAAW WIFQFSLITT VLAILQIPFI SVIVARERMG VYAYIGVFEA VSRLSIAYAL 180 LLVDNSDKLI LYGGLLAFVQ ILILIYYAGY CFFMFPECRF YFYWENVLVK KMGSFISYNL 240 FGCFAWAVSV QGVNIVLNLF FGPTMNAARA ISVQVNAAVV SFTESIITAI KPQVIKSYAK 300 GEYSNMYELI EKSSKFSFFL ILLLSTPILF QTEFILNIWL NNVPDFTILF VRLIVIESLI 360 YSFVPPLWIA INATGRIKNS QTYGRLLTFS VLPASYLLLK FYLIPWIPFV LFIIAQLMYF 420 IYNLNDVSRQ IGLNVNAYIK LVIYPSMKVL LNVILVLFII RYILGFSKMN SIVEIVLSLL 480 VVVLSVCLFG VDKNERHYIS LFVKKILKIE SDL 513
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSJ3-F1-model_v4 | 7 | 510 | 1 | 478 | 0.8547 |
0.9001 |
| AF-H9L497-F1-model_v4 | 5 | 513 | 1 | 492 | 0.8533 |
0.8871 |
| AF-Q2G262-F1-model_v4 | 3 | 508 | 1 | 476 | 0.8532 |
0.8994 |
| AF-Q58467-F1-model_v4 | 3 | 506 | 1 | 506 | 0.8473 |
0.8754 |
| AF-Q8DPI1-F1-model_v4 | 6 | 512 | 1 | 494 | 0.8463 |
0.8791 |
| AF-P77377-F1-model_v4 | 5 | 513 | 1 | 492 | 0.8402 |
0.8758 |
| AF-Q2FXH6-F1-model_v4 | 5 | 509 | 1 | 551 | 0.827 |
0.8861 |
| AF-P37169-F1-model_v4 | 1 | 502 | 2 | 524 | 0.8267 |
0.8702 |
| AF-Q32ET1-F1-model_v4 | 7 | 499 | 1 | 509 | 0.8205 |
0.8685 |
| AF-A0A1A7RX54-F1-model_v4 | 2 | 510 | 1 | 528 | 0.8174 |
0.8555 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 5 | 506 | 1 | 508 | 0.8474 |
0.883 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 506 | 29 | 545 | 0.8015 |
0.8535 |
| QNU38870.1 | GT4 | 7 | 513 | 1 | 481 | 0.7576 |
0.883 |
| QJC17489.1 | GT2 | 1 | 511 | 212 | 848 | 0.7304 |
0.9187 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 7 | 513 | 1 | 619 | 0.6797 |
0.8816 |
| AF-D1BIF1-F1-model_v4 | GT4 | 7 | 513 | 8 | 661 | 0.6755 |
0.8954 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 513 | 1 | 672 | 0.6736 |
0.855 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 11 | 513 | 1 | 820 | 0.6705 |
0.8526 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 2 | 513 | 1 | 586 | 0.6627 |
0.8341 |
| AF-D7BDH0-F1-model_v4 | GT4 | 7 | 513 | 1 | 540 | 0.6564 |
0.8492 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 5 | 506 | 1 | 508 | 0.8474 |
0.883 |
| A0A160T2N7 | GT28 | 1 | 506 | 29 | 545 | 0.8015 |
0.8535 |
| QNU38870.1 | GT4 | 7 | 513 | 1 | 481 | 0.7576 |
0.883 |
| QJC17489.1 | GT2 | 1 | 511 | 212 | 848 | 0.7304 |
0.9187 |
| A0A3Q9G719 | GT4 | 7 | 513 | 1 | 619 | 0.6797 |
0.8816 |
| D1BIF1 | GT4 | 7 | 513 | 8 | 661 | 0.6755 |
0.8954 |
| A0A517Z2I8 | GT2 | 1 | 513 | 1 | 672 | 0.6736 |
0.855 |
| A0A2U8PPB3 | GT4 | 11 | 513 | 1 | 820 | 0.6705 |
0.8526 |
| A0A3T0RPT8 | GT4 | 2 | 513 | 1 | 586 | 0.6627 |
0.8341 |
| D7BDH0 | GT4 | 7 | 513 | 1 | 540 | 0.6564 |
0.8492 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 17 | 499 | 1 | 496 | 0.8289 |
0.8804 |
| 7wag-assembly1.cif.gz_A | 8 | 499 | 1 | 509 | 0.813 |
0.8699 |
| 6nc6-assembly2.cif.gz_B | 13 | 497 | 1 | 461 | 0.801 |
0.8601 |
| 6cc4-assembly1.cif.gz_A | 1 | 506 | 41 | 608 | 0.7704 |
0.8593 |
| 6fhz-assembly1.cif.gz_A | 8 | 435 | 5 | 436 | 0.7564 |
0.851 |
| 4mlb-assembly1.cif.gz_C | 3 | 433 | 3 | 448 | 0.694 |
0.7907 |
| 6hfb-assembly3.cif.gz_C | 3 | 433 | 3 | 447 | 0.6926 |
0.7885 |
| 6gwh-assembly1.cif.gz_A | 4 | 433 | 4 | 435 | 0.6864 |
0.7746 |
| 3wbn-assembly1.cif.gz_A | 3 | 433 | 5 | 446 | 0.6846 |
0.7792 |
| 6z70-assembly1.cif.gz_A | 3 | 433 | 2 | 442 | 0.6795 |
0.7695 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 9 | 512 | 1 | 505 | 0.9033 |
0.9255 |
| AF-Q58467-F1-model_v4 | 3 | 506 | 1 | 506 | 0.8473 |
0.8754 |
| AF-Q48457-F1-model_v4 | 4 | 507 | 1 | 483 | 0.8448 |
0.889 |
| AF-P77377-F1-model_v4 | 5 | 513 | 1 | 492 | 0.8402 |
0.8758 |
| AF-P33699-F1-model_v4 | 1 | 513 | 1 | 490 | 0.8372 |
0.8766 |
| AF-O34674-F1-model_v4 | 4 | 510 | 1 | 542 | 0.8315 |
0.881 |
| AF-P37169-F1-model_v4 | 1 | 502 | 2 | 524 | 0.8267 |
0.8702 |
| AF-O34238-F1-model_v4 | 2 | 501 | 1 | 524 | 0.8245 |
0.8723 |
| AF-O83529-F1-model_v4 | 4 | 509 | 1 | 526 | 0.8223 |
0.861 |
| AF-O32273-F1-model_v4 | 3 | 510 | 1 | 483 | 0.822 |
0.866 |