PROTEIN: Rep_549_c_0_2505
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Protein File & Metadata
Source:
Rep_549_c_0_2505.pdb
Genome ID:
Protein ID:
Rep_549_c_0_2505
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Protein Sequence
MKQITYIILA AMLLLCGGFG YERLMADRDT DMNRKGELSD IAESVTAIPL KPINGKSLTD 60 AHDIQKDGND LFLICQGILY RFNRQGELVC QITQPEEIKV AGYLVHSLKK QLIVLGNVDD 120 IYYYTFDGEL LFKKKLRKDF NEEQLLSAVL YKGKIYTAER VIEKDTLHRT CVKQQVQVYD 180 TCFQPLESHP IVEVSLTHPV LFPNLQSVRL CVSPDSGEMY AYSAPYQPEH LLRDSLFIHQ 240 TGGKEDIEEG EIPLFPVCMG SRYWMAANQD VEKTEQRYLF CWDRFENQAW QLNEGFTDDF 300 FQTGSVAKLE PMDLYGQTYS FTKFGKSLET SFPEAADSTV VFIVEMKA 348
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8IFM8-F1-model_v4 | 2 | 348 | 7 | 358 | 0.5986 |
0.6372 |
| AF-Q4DBW7-F1-model_v4 | 37 | 346 | 70 | 392 | 0.5154 |
0.6225 |
| AF-A0A077ZIR2-F1-model_v4 | 33 | 347 | 17 | 317 | 0.454 |
0.6192 |
| AF-A0A0K0DTM7-F1-model_v4 | 31 | 348 | 360 | 615 | 0.434 |
0.735 |
| AF-A0A044QV33-F1-model_v4 | 31 | 347 | 407 | 711 | 0.4277 |
0.6501 |
| AF-A0A044SIC0-F1-model_v4 | 38 | 348 | 155 | 499 | 0.4258 |
0.6237 |
| AF-Q9BRZ2-F1-model_v4 | 28 | 348 | 482 | 752 | 0.4114 |
0.7037 |
| AF-A0A368UHK5-F1-model_v4 | 1 | 344 | 51 | 648 | 0.3826 |
0.5929 |
| AF-I1NJ39-F1-model_v4 | 1 | 348 | 707 | 1097 | 0.3804 |
0.5846 |
| AF-A0A044UUK8-F1-model_v4 | 37 | 348 | 27 | 338 | 0.3631 |
0.6041 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A854QDM7 | GH33 | 40 | 348 | 1 | 372 | 0.5243 |
0.6261 |
| UJR85140.1 | CBM21 | 31 | 348 | 274 | 648 | 0.4449 |
0.6311 |
| A0A3G3JYZ3 | GH5_13 , GH93 | 29 | 348 | 371 | 734 | 0.4376 |
0.6417 |
| B8GKW7 | CBM6 | 23 | 348 | 25 | 326 | 0.422 |
0.6642 |
| A0A5C5Y3B9 | GH150 | 46 | 339 | 32 | 396 | 0.3748 |
0.6338 |
| A0A7I7RXS4 | GH39 | 2 | 348 | 288 | 691 | 0.3436 |
0.5602 |
| A0A7R8VG16 | GH79 | 2 | 348 | 1925 | 3304 | 0.3078 |
0.5718 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2co0-assembly1.cif.gz_A | 40 | 347 | 1 | 304 | 0.5584 |
0.6182 |
| 8g3e-assembly2.cif.gz_B | 26 | 348 | 3 | 308 | 0.5573 |
0.6185 |
| 6ufx-assembly1.cif.gz_A | 40 | 347 | 1 | 303 | 0.5567 |
0.6181 |
| 4cy3-assembly1.cif.gz_A | 40 | 347 | 1 | 303 | 0.5553 |
0.6164 |
| 6pg6-assembly1.cif.gz_A | 40 | 347 | 1 | 301 | 0.5526 |
0.6157 |
| 2gnq-assembly1.cif.gz_A | 21 | 348 | 9 | 316 | 0.5511 |
0.6152 |
| 3mxx-assembly1.cif.gz_A | 22 | 348 | 4 | 315 | 0.5495 |
0.6053 |
| 3n0e-assembly1.cif.gz_A | 22 | 348 | 4 | 315 | 0.5489 |
0.6051 |
| 3uvk-assembly1.cif.gz_A | 39 | 347 | 1 | 299 | 0.5478 |
0.6116 |
| 3ur4-assembly1.cif.gz_A | 26 | 348 | 1 | 303 | 0.5409 |
0.602 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8IFM8-F1-model_v4 | 2 | 348 | 7 | 358 | 0.5986 |
0.6372 |
| AF-P74598-F1-model_v4 | 29 | 348 | 42 | 347 | 0.5279 |
0.6168 |
| AF-A8X8C6-F1-model_v4 | 27 | 348 | 59 | 368 | 0.5242 |
0.6193 |
| AF-Q6ZMY6-F1-model_v4 | 35 | 348 | 86 | 396 | 0.4642 |
0.6018 |
| AF-A7MB12-F1-model_v4 | 32 | 345 | 16 | 319 | 0.4446 |
0.6087 |
| AF-E1BD59-F1-model_v4 | 28 | 348 | 460 | 729 | 0.415 |
0.7062 |
| AF-Q9BRZ2-F1-model_v4 | 28 | 348 | 482 | 752 | 0.4114 |
0.7037 |
| AF-Q9P7N3-F1-model_v4 | 34 | 348 | 18 | 357 | 0.387 |
0.6041 |
| AF-Q55563-F1-model_v4 | 1 | 348 | 916 | 1660 | 0.3681 |
0.6176 |
| AF-Q6C462-F1-model_v4 | 39 | 347 | 1 | 309 | 0.3539 |
0.5856 |