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PROTEIN: Rep_541_c_6_17

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Protein File & Metadata
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Source:
Rep_541_c_6_17.pdb
Genome ID:
Rep_541
Protein ID:
Rep_541_c_6_17

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKGIMKHSVC   YRTAAALLLL   GLTCGNSFAQ   EEKKSTEPQT   ENSSKEEGNR   NVMLNAASAN 60
GPREIQIGLP   SADVNVLENG   IPVTYATNPH   SVNSLWRADA   SLSHVGLLKI   SETAITTGNI 120
GYAVNSFTQL   GQKGFHGTLN   YKSNHFGMQE   FSLNVNGDIA   KDWFYSGSIY   QDFDPGTFKI 180
KSTPFQDRTQ   IYKFALTKKY   NDNRGELTAI   YHYSNSHPVY   NYATQSAPFI   YVGDGSVKEF 240
GKFALGTTSY   LPVDNEMMYR   DMRTGEIRKT   NLYDATQNKG   SEFTLMNDYT   WDNGLNWKTV 300
MKYDHSTGSF   VYQTPMSLDQ   NEAGINYLYE   AADGSMQPYT   GDYVQSRMSC   LNRGFIDFFM 360
FTTELSRNVG   NSTWRLGLNE   WYYDIDYTSA   TTMYDQSVPM   DGSYPVRLYN   ADYATYADRA 420
YAGNGYYYDF   NKNASEYYKG   HENKVALYFT   HDWDITDQLN   LYYGARLEYQ   ALRGENAAVK 480
NAEGEYVGRF   ANYYLGTTAP   DGTKITPTPM   SYDWLNYALT   AAATYKLTKA   FGLTGDFTYI 540
TQHPKIESFA   PATMPNTDKI   SVPLGRAGIY   YNNSWLSLTS   LFSYISKTNN   NSTLNLQHKT 600
PTGQTEIMAA   PLTYDIKTLG   WTTDVVTHPF   KGFDFHFLFT   YQKPTYKKYE   TSVTFSDGYV 660
GQINATGNIV   AEIPQIIVEI   DPSYMITKDL   KIWTSFRYFS   KTYANINDAY   YFNGRWETFG 720
GLNWQVNKKL   ALGCTVVNFL   NQTGAKGSIA   GAELIEKEDA   GQYAGHVMAG   SYIRPFTVEF 780
SASLKF 786
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0CL48-F1-model_v4 19 786 48 702 0.7426 0.8469
AF-A0A0H3GUM0-F1-model_v4 28 786 36 706 0.7362 0.8241
AF-Q9HZT6-F1-model_v4 29 786 39 718 0.7348 0.8189
AF-Q9I683-F1-model_v4 30 786 36 730 0.734 0.8081
AF-Q0P814-F1-model_v4 2 786 2 709 0.7281 0.7768
AF-A0A0H3H0D6-F1-model_v4 25 786 31 672 0.7281 0.829
AF-Q9HUX3-F1-model_v4 27 786 39 708 0.726 0.8147
AF-A0A0H3GNH3-F1-model_v4 28 786 25 709 0.7258 0.798
AF-A0A0H3GPE7-F1-model_v4 30 786 21 690 0.7248 0.8043
AF-Q32I81-F1-model_v4 107 786 1 609 0.7209 0.821
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Structural Homologs - CAZyme-ID50
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6z8a-assembly1.cif.gz_A 26 786 3 677 0.7575 0.8256
8a60-assembly1.cif.gz_A 24 786 7 677 0.7555 0.8282
4epa-assembly1.cif.gz_A 20 786 10 631 0.7456 0.8474
8b14-assembly1.cif.gz_A 21 786 9 696 0.7394 0.8031
3qlb-assembly2.cif.gz_B 27 786 1 670 0.7372 0.8063
5fp1-assembly1.cif.gz_A 21 786 6 701 0.7371 0.795
4cu4-assembly1.cif.gz_A 21 786 7 693 0.7368 0.7999
2fcp-assembly1.cif.gz_A 22 786 9 705 0.7335 0.7923
3qlb-assembly1.cif.gz_A 27 786 1 673 0.7325 0.7997
6bpo-assembly4.cif.gz_D 25 786 6 711 0.7307 0.7835
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-E1W8M5-F1-model_v4 24 786 41 702 0.7464 0.8428
AF-P0CL48-F1-model_v4 19 786 48 702 0.7426 0.8469
AF-Q01674-F1-model_v4 28 786 36 710 0.7412 0.8271
AF-P46359-F1-model_v4 25 786 24 672 0.7287 0.8214
AF-A1JTG3-F1-model_v4 25 786 31 672 0.7281 0.829
AF-P0C2M9-F1-model_v4 25 786 31 672 0.7279 0.8289
AF-Q47162-F1-model_v4 28 786 52 735 0.7269 0.815
AF-A0A0H2ZI93-F1-model_v4 28 786 38 708 0.7266 0.8142
AF-Q9HUX3-F1-model_v4 27 786 39 708 0.726 0.8147
AF-Q1REC0-F1-model_v4 31 786 7 760 0.7163 0.7458
Download Full SwissProt Results