PROTEIN: Rep_541_c_2_29
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Protein File & Metadata
Source:
Rep_541_c_2_29.pdb
Genome ID:
Protein ID:
Rep_541_c_2_29
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Detailed structural information will appear here after analysis...
Protein Sequence
MKSLNQGFWL ILCLFCSVSL CGQIKLPSGW QSSFVRITSE GKLIYIPDEK GNTIPDFSQV 60 GYHHGNRSLP FPKVADVVLT PVEGKDNRPM IQAAIDEVSR KQPDADGHRG TILLKRGLYP 120 VHGTIQISQS GIVLMGDGDN VHETCLLAVG KERFPLIKVS GKGRVEEIEG TRVRITDHFV 180 PVGTTSLTVE KSNAFRPGDR VIVFRPGTDE WIHDIRMDCI VERKGTRQWK ASEYNLSYER 240 EVIKVEGKRI YIDNPIFMQM EKKYGGGEVY KYTFNGRIRE VGVMNICLES EFEDYEDTNH 300 GWIGLLFDKV ENCWARNITC RYFGYAGISC DTASKNVTVA DCRCLEMKSM ITGGFRYSFN 360 NCGQQNLFMN CQATEGRHDF VTGAKVCGPN VFYNCIASQT YADIGPHHRW ASGTLYDNIY 420 TDGEINVQDR GNWGSGHGWA GVTQVLWNCM AKGAAIQSPW ASGDNYCIGL KGKKVQGRLS 480 GRPDARWEGQ NESNIFPRSL YVAQLMARHK NLNLTILNK 519
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0P0NEA0-F1-model_v4 | PL29 | 3 | 519 | 1 | 511 | 0.7957 |
0.8172 |
| ULL18128.1 | CBM32 | 13 | 519 | 28 | 534 | 0.7933 |
0.9288 |
| AF-A0A5C0VFY9-F1-model_v4 | PL29 | 1 | 511 | 1 | 505 | 0.7912 |
0.8174 |
| AF-F0S4Y2-F1-model_v4 | PL29 | 14 | 518 | 1 | 501 | 0.7907 |
0.8189 |
| WDE96480.1 | PL0 | 1 | 513 | 1 | 503 | 0.7895 |
0.8216 |
| AF-A0A1D7QJS2-F1-model_v4 | PL29 | 10 | 518 | 5 | 511 | 0.7849 |
0.8119 |
| BCM93510.1 | PL0 | 1 | 514 | 6 | 515 | 0.7793 |
0.8081 |
| AF-C6Y0W6-F1-model_v4 | PL29 | 18 | 511 | 9 | 503 | 0.7788 |
0.8185 |
| AF-A0A7G9NZ33-F1-model_v4 | PL29 | 22 | 511 | 3 | 491 | 0.7778 |
0.8157 |
| WEA01137.1 | CBM32 | 28 | 519 | 20 | 528 | 0.774 |
0.9334 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ULL18128.1 | CBM32 | 13 | 519 | 28 | 534 | 0.7933 |
0.9288 |
| A0A7G9NZ33 | PL29 | 22 | 511 | 3 | 491 | 0.7778 |
0.8157 |
| WEA01137.1 | CBM32 | 28 | 519 | 20 | 528 | 0.774 |
0.9334 |
| F0SNC7 | PL29 | 1 | 513 | 1 | 507 | 0.771 |
0.8005 |
| A0A3N7DK10 | PL29 | 17 | 517 | 9 | 514 | 0.7569 |
0.8049 |
| A0A290S4E3 | PL29 | 15 | 509 | 17 | 527 | 0.7563 |
0.8107 |
| D5EI33 | PL29 | 21 | 513 | 17 | 515 | 0.7549 |
0.8057 |
| QZE12858.1 | PL29 | 10 | 517 | 7 | 515 | 0.7544 |
0.7888 |
| W0J0A9 | PL29 | 9 | 512 | 16 | 574 | 0.7485 |
0.8242 |
| A0A4V0HX91 | PL29 | 29 | 513 | 22 | 534 | 0.744 |
0.8183 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ru4-assembly1.cif.gz_C | 75 | 493 | 1 | 416 | 0.5475 |
0.7251 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.