PROTEIN: Rep_541_c_22_13
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Protein File & Metadata
Source:
Rep_541_c_22_13.pdb
Genome ID:
Protein ID:
Rep_541_c_22_13
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Protein Sequence
MAVTIKKVTT KRELKRFIRF NYKLYKNNPY SVPDLFDDML NTFNKRKNAA FEFCEAEYFM 60 AYKDGKLVGR VAAIINHKAN QTWNKKDVRF GWIDFTDDTE VSKALIQAVK QWGKERGMTN 120 IVGPLGFTDM DAEGMLIEGF DQLGTMATIY NYPYYPKHME QMGFVKDADW VEYKLYVPDA 180 IPDKHRRIAD LIQRKYNLKI KKYTSGRKIA KDYGQAIFKL INEAYSQLYG YSALSQRQID 240 QYVKMYLPIL DLRMVTLVTD QDDQLIAVGI SMPSLSEALQ KAHGRLLPFG WYYLLKALFF 300 KRRAKMLDLL LVAVKPEYQN KGVNALLFSD LIPVYQQLGF EYAESNPEME LNSKVQAQWD 360 YFRSEQHKRR RAFRKAIG 378
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 377 | 16 | 390 | 0.9008 |
0.9346 |
| AF-X8EWX4-F1-model_v4 | 1 | 377 | 19 | 393 | 0.8916 |
0.9294 |
| AF-P9WJM7-F1-model_v4 | 2 | 378 | 1 | 313 | 0.7161 |
0.8035 |
| AF-Q9CBC9-F1-model_v4 | 3 | 378 | 1 | 309 | 0.7067 |
0.7993 |
| AF-K0EMI4-F1-model_v4 | 1 | 378 | 12 | 315 | 0.6977 |
0.8083 |
| AF-A0A0H3GIP5-F1-model_v4 | 1 | 378 | 1 | 274 | 0.653 |
0.7822 |
| AF-Q54DW0-F1-model_v4 | 2 | 378 | 1 | 321 | 0.644 |
0.7205 |
| AF-K0EYT8-F1-model_v4 | 1 | 376 | 11 | 259 | 0.6241 |
0.7836 |
| AF-K0EUT6-F1-model_v4 | 1 | 378 | 14 | 316 | 0.6053 |
0.708 |
| AF-A0A1D8PMF7-F1-model_v4 | 1 | 378 | 8 | 390 | 0.6037 |
0.6522 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 377 | 16 | 339 | 0.7436 |
0.8361 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 378 | 410 | 740 | 0.4911 |
0.7356 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 378 | 583 | 968 | 0.4796 |
0.6954 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 378 | 583 | 957 | 0.4787 |
0.6965 |
| UPL03096.1 | GH3 | 1 | 378 | 286 | 966 | 0.4765 |
0.6899 |
| AF-G2XQQ8-F1-model_v4 | GH3 | 1 | 378 | 608 | 981 | 0.4754 |
0.6973 |
| A0A7C8H9M3 | GH3 | 1 | 375 | 550 | 877 | 0.475 |
0.7564 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 378 | 504 | 834 | 0.4731 |
0.7353 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 377 | 534 | 859 | 0.473 |
0.7535 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 377 | 537 | 859 | 0.4719 |
0.7575 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 377 | 16 | 339 | 0.7436 |
0.8361 |
| UPL03096.1 | GH3 | 1 | 378 | 286 | 966 | 0.4765 |
0.6899 |
| A0A7C8H9M3 | GH3 | 1 | 375 | 550 | 877 | 0.475 |
0.7564 |
| A0A7U2MF49 | GH3 | 1 | 378 | 504 | 834 | 0.4731 |
0.7353 |
| A0A7H8QUW2 | GH3 | 1 | 378 | 209 | 949 | 0.4624 |
0.6657 |
| Q6MFP1 | GH3 | 1 | 378 | 599 | 1083 | 0.4623 |
0.6898 |
| A0A161HFD8 | GH3 | 1 | 378 | 572 | 969 | 0.4611 |
0.6677 |
| V9M3A9 | GH3 | 1 | 375 | 537 | 858 | 0.4604 |
0.7392 |
| G1XST4 | GH3 | 1 | 378 | 606 | 1002 | 0.4557 |
0.6659 |
| E5A892 | GH3 | 1 | 378 | 541 | 883 | 0.4556 |
0.6985 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5kgh-assembly1.cif.gz_A | 3 | 378 | 1 | 316 | 0.7222 |
0.807 |
| 7q3a-assembly1.cif.gz_A | 1 | 377 | 17 | 339 | 0.7201 |
0.8138 |
| 5kf2-assembly1.cif.gz_A | 3 | 378 | 1 | 316 | 0.7191 |
0.805 |
| 5kga-assembly1.cif.gz_B | 3 | 378 | 1 | 316 | 0.7182 |
0.8028 |
| 5kgh-assembly1.cif.gz_B | 3 | 378 | 1 | 313 | 0.7166 |
0.8043 |
| 2c27-assembly1.cif.gz_A | 6 | 376 | 1 | 301 | 0.7156 |
0.8142 |
| 5kf1-assembly1.cif.gz_B | 3 | 378 | 1 | 312 | 0.7141 |
0.8025 |
| 7q3a-assembly2.cif.gz_B | 1 | 377 | 16 | 340 | 0.7141 |
0.8042 |
| 1p0h-assembly1.cif.gz_A | 3 | 375 | 1 | 290 | 0.7034 |
0.8153 |
| 2wpw-assembly4.cif.gz_D | 2 | 378 | 1 | 322 | 0.6705 |
0.7492 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 377 | 16 | 390 | 0.9008 |
0.9346 |
| AF-D3Q4A8-F1-model_v4 | 2 | 377 | 1 | 306 | 0.7552 |
0.8516 |
| AF-Q5EDG0-F1-model_v4 | 2 | 375 | 1 | 301 | 0.7478 |
0.8495 |
| AF-C6WPR7-F1-model_v4 | 2 | 375 | 1 | 297 | 0.7423 |
0.8488 |
| AF-C7QKH8-F1-model_v4 | 1 | 375 | 1 | 314 | 0.7416 |
0.8288 |
| AF-A6W6C7-F1-model_v4 | 1 | 378 | 3 | 303 | 0.7409 |
0.8449 |
| AF-D1A4F4-F1-model_v4 | 1 | 378 | 1 | 297 | 0.7407 |
0.8463 |
| AF-B8HD44-F1-model_v4 | 1 | 378 | 5 | 322 | 0.7397 |
0.8268 |
| AF-B0RAV5-F1-model_v4 | 1 | 376 | 11 | 304 | 0.7396 |
0.8618 |
| AF-C7MRC4-F1-model_v4 | 2 | 377 | 1 | 306 | 0.7394 |
0.8347 |