PROTEIN: Rep_529_c_8_34
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Protein File & Metadata
Source:
Rep_529_c_8_34.pdb
Genome ID:
Protein ID:
Rep_529_c_8_34
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Detailed structural information will appear here after analysis...
Protein Sequence
MAGPNMPTRV MMFRDFVPDK IRVFLCLFFA VAFQFSGGIY LSSVSQMVGS LALMQEDVMM 60 AGYASFVGMT IIFPILFRLK FRFTTRSILL FVCPALIVCN LITMRTDSLP VLVIVCFFAG 120 MLRMWGTFEA LSNVQLSLTP TRNFAVFFPV VYMIVLGSIQ LSGLLTVYLG YWSNWHSMHW 180 FIMGLLFVLW GLTATLTCHF RFMKPLPLFG IDWLGGALWS IFLLSVIFVF EYGKFYDWFD 240 SIQILLGTLI AILSLALSIH RMIVRRHPYI ALEAFKYRNL TSLLFLFLML CFFLAAPTVL 300 QNIFTHGILQ YDVLNDVSLN WWNFGGTVLG CIFAYQWHVR LHGGYKVPVF LGFALIVGYQ 360 CFMYFLIDPN MNIEWLYGPT LLRGAGYIIL YISLTVYVTG IVPFQHFFQV LSILGFIRTG 420 FGSVLGGAIY CRVWQYILPE NFQTLSIELD EVNTALNMQT FHSIYGEAMK QATLVSLKEM 480 YGWVCIVGVL FLALILFEKF LNQNVVGRLP RIRRIKHLMK RENA 524
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 3 | 514 | 2 | 506 | 0.8339 |
0.8699 |
| AF-Q5F680-F1-model_v4 | 7 | 514 | 3 | 507 | 0.8255 |
0.8583 |
| AF-A0A0H3GU91-F1-model_v4 | 6 | 511 | 4 | 508 | 0.8089 |
0.848 |
| AF-Q9HZ88-F1-model_v4 | 26 | 509 | 1 | 493 | 0.8081 |
0.8679 |
| AF-Q8ZMK8-F1-model_v4 | 6 | 511 | 4 | 508 | 0.8075 |
0.8465 |
| AF-A0A133CZJ2-F1-model_v4 | 3 | 517 | 1 | 490 | 0.8058 |
0.8508 |
| AF-Q9I008-F1-model_v4 | 6 | 511 | 19 | 527 | 0.8014 |
0.8503 |
| AF-Q9I4A2-F1-model_v4 | 2 | 504 | 2 | 503 | 0.8006 |
0.8361 |
| AF-A0A0H3GUZ8-F1-model_v4 | 3 | 511 | 3 | 497 | 0.7981 |
0.8404 |
| AF-A0A0H3GPJ5-F1-model_v4 | 4 | 506 | 2 | 470 | 0.7935 |
0.8584 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 3 | 506 | 8 | 533 | 0.7238 |
0.7919 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 4 | 521 | 15 | 479 | 0.6657 |
0.7416 |
| AF-A2S189-F1-model_v4 | GH3 | 1 | 506 | 1 | 413 | 0.6596 |
0.7582 |
| ARF89445.1 | GT1 | 1 | 505 | 11 | 953 | 0.65 |
0.8742 |
| WBC00074.1 | CBM42 , GH2 | 1 | 508 | 3 | 492 | 0.6142 |
0.6702 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 7 | 517 | 30 | 678 | 0.6054 |
0.8071 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 1 | 524 | 1 | 764 | 0.5693 |
0.689 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 1 | 517 | 5 | 475 | 0.5638 |
0.75 |
| AF-W8VNY0-F1-model_v4 | GH17 | 1 | 518 | 1 | 471 | 0.5588 |
0.7425 |
| AF-A0A1Y0M8J3-F1-model_v4 | GH17 | 1 | 519 | 2 | 474 | 0.5583 |
0.7395 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 3 | 506 | 8 | 533 | 0.7238 |
0.7919 |
| A2S189 | GH3 | 1 | 506 | 1 | 413 | 0.6596 |
0.7582 |
| ARF89445.1 | GT1 | 1 | 505 | 11 | 953 | 0.65 |
0.8742 |
| A0A9W8R2E6 | GH88 | 1 | 514 | 39 | 503 | 0.6156 |
0.6996 |
| WBC00074.1 | CBM42 , GH2 | 1 | 508 | 3 | 492 | 0.6142 |
0.6702 |
| A0A387HHJ8 | GT1 | 7 | 517 | 30 | 678 | 0.6054 |
0.8071 |
| A0A7H8RF34 | CBM24 | 4 | 510 | 126 | 761 | 0.5455 |
0.6799 |
| A0A918L8E6 | GT2 | 7 | 510 | 1 | 440 | 0.5409 |
0.7232 |
| S5VEU6 | CE14 | 2 | 524 | 12 | 680 | 0.5358 |
0.6575 |
| A0A9Q9RZ67 | GH78 | 7 | 513 | 748 | 1452 | 0.5326 |
0.8132 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 7 | 503 | 1 | 483 | 0.7742 |
0.8242 |
| 8pnl-assembly2.cif.gz_C | 7 | 504 | 1 | 486 | 0.7658 |
0.8145 |
| 7y58-assembly1.cif.gz_A | 8 | 510 | 7 | 510 | 0.7651 |
0.8054 |
| 7d5p-assembly2.cif.gz_B | 22 | 503 | 1 | 413 | 0.7262 |
0.8282 |
| 7d5p-assembly1.cif.gz_A | 20 | 503 | 1 | 408 | 0.726 |
0.8317 |
| 7d5q-assembly2.cif.gz_B | 22 | 503 | 1 | 411 | 0.7228 |
0.8258 |
| 7d5q-assembly1.cif.gz_A | 22 | 503 | 1 | 403 | 0.7187 |
0.8276 |
| 6kkl-assembly1.cif.gz_A | 17 | 504 | 1 | 372 | 0.718 |
0.852 |
| 6kkk-assembly3.cif.gz_C | 15 | 506 | 1 | 381 | 0.7074 |
0.8327 |
| 6kkj-assembly1.cif.gz_B | 19 | 503 | 1 | 357 | 0.7041 |
0.8498 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 7 | 511 | 3 | 507 | 0.8328 |
0.8651 |
| AF-P0DPR7-F1-model_v4 | 1 | 506 | 1 | 512 | 0.828 |
0.8638 |
| AF-P0AEJ1-F1-model_v4 | 9 | 509 | 3 | 507 | 0.8196 |
0.8647 |
| AF-P0AEJ0-F1-model_v4 | 8 | 510 | 3 | 508 | 0.8184 |
0.8607 |
| AF-P52600-F1-model_v4 | 9 | 510 | 7 | 511 | 0.8169 |
0.8611 |
| AF-P44927-F1-model_v4 | 9 | 509 | 7 | 510 | 0.8144 |
0.8588 |
| AF-P32369-F1-model_v4 | 4 | 506 | 4 | 474 | 0.8053 |
0.8708 |
| AF-P96712-F1-model_v4 | 6 | 513 | 1 | 508 | 0.7898 |
0.8219 |
| AF-O35018-F1-model_v4 | 5 | 510 | 9 | 479 | 0.7869 |
0.8537 |
| AF-Q8Y9K8-F1-model_v4 | 3 | 506 | 3 | 471 | 0.7856 |
0.8482 |