PROTEIN: Rep_529_c_30_16
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Protein File & Metadata
Source:
Rep_529_c_30_16.pdb
Genome ID:
Protein ID:
Rep_529_c_30_16
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Protein Sequence
MKAEKKQFSN RMGAAVLLLA LACVNGYAQD NKTSNDGSSK EEGNRNVMLN AASANGPREI 60 QIGLPSADVN VLENGVPVTY ATNPHSVNSL WRADASLSHV GLLKISETAI TTGNIGYAVN 120 SFTQLGQKGF NGTLNYKSNH FGMQEISLNL NGEIAKDWFY SGSIYQDFDP GTFKIKSTPF 180 QDRTQIYKFA LTKHYNQNRG EFTAMYHYSN SHPVYMYATQ SAPFVYVGDG SVRELGAFAL 240 GTTSYLPVDN EMIYRDMKTG ELKKTSLYDA VQNKGSEVSL MNNYNWDNGL SWKVIMKYDH 300 ATGSCVYQTP MELSQRANSS INYQYEGEDG RMQAYNGEYV QSRMSCLNRG FIDEFMFTTE 360 LSRKLSNGTW RLGLNEWYYD IDYASNTTMY DQSVPTDGSY PVRLYNPDYA TSTSRSYDGN 420 GYYYDFNKNA SEYYKGHENK LAVYFTHDWD VTDKFNLYYG ARLEYQALRG NNAAVKDANG 480 NFVGRFADYH LGATAPNGTV IAPTPMDYDW FNYALSAAAT YKLTKEFGFT GDFTYITQHP 540 KLENFAPAVS PNVDKISVPL GRVGIYYNNE WLSLTSLFSY ISKTNNNSTL NLQHSINGEN 600 EILAAPLTYD IKTLGWTTDV VTHPFKGFDL HFLFTYQKPT YKKYETSVTF SDGYVGQINA 660 TGNIVAEIPQ VIVEIDPSYM ITKDLKIWTS FRYFSKTYAN INDAYYFNGR WETFGGLNWQ 720 VNKKLSLGCS VVNFLNQTGA KGSIAGAELV TKDEAGKYAN TVMAGSYIRP FTVEFSAQIK 780 F 781
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0CL48-F1-model_v4 | 20 | 781 | 49 | 702 | 0.7414 |
0.8445 |
| AF-A0A0H3GUM0-F1-model_v4 | 30 | 781 | 32 | 706 | 0.7354 |
0.816 |
| AF-Q9HZT6-F1-model_v4 | 27 | 781 | 38 | 718 | 0.7305 |
0.8104 |
| AF-A0A0H3H0D6-F1-model_v4 | 29 | 781 | 23 | 672 | 0.7301 |
0.8199 |
| AF-Q9I683-F1-model_v4 | 21 | 781 | 51 | 730 | 0.7288 |
0.8167 |
| AF-A0A0H3GNH3-F1-model_v4 | 31 | 781 | 22 | 709 | 0.7265 |
0.7936 |
| AF-A0A0H3GPE7-F1-model_v4 | 27 | 781 | 19 | 690 | 0.7257 |
0.8009 |
| AF-Q9HUX3-F1-model_v4 | 31 | 781 | 34 | 708 | 0.7252 |
0.8058 |
| AF-Q0P814-F1-model_v4 | 29 | 781 | 28 | 709 | 0.725 |
0.7985 |
| AF-Q8ZRQ2-F1-model_v4 | 30 | 781 | 46 | 729 | 0.7215 |
0.8028 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a60-assembly1.cif.gz_A | 25 | 781 | 5 | 677 | 0.7534 |
0.8219 |
| 6z8a-assembly1.cif.gz_A | 20 | 781 | 22 | 677 | 0.753 |
0.8408 |
| 4epa-assembly1.cif.gz_A | 21 | 781 | 11 | 631 | 0.7428 |
0.8438 |
| 8b14-assembly1.cif.gz_A | 20 | 781 | 19 | 696 | 0.7411 |
0.814 |
| 4cu4-assembly1.cif.gz_A | 20 | 781 | 17 | 693 | 0.7387 |
0.8108 |
| 5fp1-assembly1.cif.gz_A | 20 | 781 | 11 | 701 | 0.7371 |
0.7984 |
| 2fcp-assembly1.cif.gz_A | 20 | 781 | 18 | 705 | 0.736 |
0.8026 |
| 1by5-assembly1.cif.gz_A | 20 | 781 | 19 | 697 | 0.7316 |
0.8036 |
| 3qlb-assembly2.cif.gz_B | 20 | 781 | 19 | 670 | 0.7307 |
0.8176 |
| 1qkc-assembly1.cif.gz_A | 20 | 781 | 18 | 707 | 0.7305 |
0.7958 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-E1W8M5-F1-model_v4 | 26 | 781 | 37 | 702 | 0.743 |
0.8321 |
| AF-P0CL48-F1-model_v4 | 20 | 781 | 49 | 702 | 0.7414 |
0.8445 |
| AF-Q01674-F1-model_v4 | 31 | 781 | 33 | 710 | 0.7393 |
0.8192 |
| AF-P46359-F1-model_v4 | 28 | 781 | 21 | 672 | 0.7278 |
0.8152 |
| AF-P0C2M9-F1-model_v4 | 32 | 781 | 26 | 672 | 0.7265 |
0.8195 |
| AF-A0A0H2ZI93-F1-model_v4 | 31 | 781 | 34 | 708 | 0.7264 |
0.8071 |
| AF-Q9HUX3-F1-model_v4 | 31 | 781 | 34 | 708 | 0.7252 |
0.8058 |
| AF-A1JTG3-F1-model_v4 | 20 | 781 | 34 | 672 | 0.7228 |
0.8249 |
| AF-Q47162-F1-model_v4 | 27 | 781 | 51 | 735 | 0.7225 |
0.8062 |
| AF-P06971-F1-model_v4 | 30 | 781 | 46 | 747 | 0.7175 |
0.7889 |