PROTEIN: Rep_512_c_5_20
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Protein File & Metadata
Source:
Rep_512_c_5_20.pdb
Genome ID:
Protein ID:
Rep_512_c_5_20
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Protein Sequence
MNKINWKLFL FLGFLFVGMN GNSQNDISST DFSNYFSRST DEVIYPDNDG FIRRWLLLEP 60 INKPNRSNTV FTDSYIRKAF TTEYFSSQFN GVPKDGDKVR VGDQILKWHA LDSKLFNVKL 120 FRFASNLDKQ VYGVLFWAVT VLNCPDDICN VRMSVGSNSA SMWWLNGEEA VILSGDRRMV 180 KDDCMSGRLT LKKGKNIIRG AVINGPGMSD FCLRFIDENG NPVKNITITY K 231
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 41 | 231 | 168 | 362 | 0.4502 |
0.6775 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 28 | 231 | 378 | 701 | 0.5711 |
0.9775 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 28 | 231 | 382 | 700 | 0.5665 |
0.9685 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 29 | 231 | 482 | 697 | 0.5596 |
0.9599 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 28 | 231 | 584 | 1048 | 0.5136 |
0.9562 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 39 | 231 | 21 | 214 | 0.4636 |
0.8517 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 14 | 231 | 34 | 277 | 0.4327 |
0.7778 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 46 | 220 | 458 | 622 | 0.4269 |
0.8618 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 39 | 220 | 22 | 201 | 0.4229 |
0.8487 |
| A0A380YJ87 | GH20 | 17 | 231 | 258 | 837 | 0.4177 |
0.7075 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 18 | 231 | 259 | 837 | 0.417 |
0.7081 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 28 | 231 | 378 | 701 | 0.5711 |
0.9775 |
| D7SFH3 | GH43_2 | 29 | 231 | 482 | 697 | 0.5596 |
0.9599 |
| A0A7G9XVI1 | GH43_2 , GH8 | 28 | 231 | 584 | 1048 | 0.5136 |
0.9562 |
| A0A402CZV5 | GH4 | 46 | 220 | 458 | 622 | 0.4269 |
0.8618 |
| A0A344TID5 | GH163 | 39 | 220 | 22 | 201 | 0.4229 |
0.8487 |
| A0A380YJ87 | GH20 | 17 | 231 | 258 | 837 | 0.4177 |
0.7075 |
| BCM93550.1 | GH2 | 39 | 231 | 948 | 1134 | 0.401 |
0.8216 |
| A0A518LMX6 | GH31 | 42 | 231 | 945 | 1147 | 0.4002 |
0.8109 |
| A0A1H1SHM5 | GH2 | 40 | 231 | 945 | 1131 | 0.3972 |
0.8117 |
| A0A495VIY0 | GH2 | 42 | 231 | 933 | 1116 | 0.3967 |
0.8216 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 41 | 231 | 168 | 362 | 0.4502 |
0.6775 |