PROTEIN: Rep_505_c_2_42
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Protein File & Metadata
Source:
Rep_505_c_2_42.pdb
Genome ID:
Protein ID:
Rep_505_c_2_42
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Protein Sequence
MYNNYKIVLN TAAGRRRYMR YLIPYVVSCG IVDRYDIWVN THNGADIEFF RRIAEKFPVV 60 NLVWQPEGVV NGNASINAFY KNCVDNDTIY FKLDDDIVWM EPGLIEKMVK FRIDHPSYFL 120 VSPLVINNAL STYLLEVEGK IRLNDYYDSH ASHPVLWKNG VFAYELHSWF LNRYLKTGRW 180 DELHLSKKEM GMARFSINAV LWFGDKMRKF KGIVPGDDEE FLSCIYPTQQ GMSNAWNGDA 240 IVAHFAFFTQ REELDRQGIL EQYGVVCAEQ WHKDDKTAKI YDAVQNILKG INANEEELMK 300 RKSPYRRIKK TITFKQQVKK VLPKVLIDLK TFFDGRKQRS GFIWED 346
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NZA9-F1-model_v4 | 1 | 282 | 69 | 411 | 0.6674 |
0.9023 |
| AF-C0NWW0-F1-model_v4 | 1 | 289 | 79 | 425 | 0.6641 |
0.8796 |
| AF-C1H7H9-F1-model_v4 | 1 | 286 | 93 | 435 | 0.6575 |
0.8884 |
| AF-C1HDV8-F1-model_v4 | 1 | 286 | 71 | 414 | 0.6558 |
0.8869 |
| AF-A0A1C1CRS5-F1-model_v4 | 1 | 280 | 115 | 462 | 0.6385 |
0.9033 |
| AF-C1HAE4-F1-model_v4 | 1 | 277 | 82 | 462 | 0.6344 |
0.9078 |
| AF-K0F8C8-F1-model_v4 | 1 | 316 | 4 | 284 | 0.5823 |
0.6596 |
| AF-A0A133CI93-F1-model_v4 | 1 | 313 | 3 | 249 | 0.581 |
0.7177 |
| AF-Q9HZM5-F1-model_v4 | 2 | 266 | 1 | 254 | 0.554 |
0.6546 |
| AF-O24928-F1-model_v4 | 4 | 346 | 1 | 252 | 0.5505 |
0.6606 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A514ZY94-F1-model_v4 | GT0 | 1 | 346 | 1 | 294 | 0.5958 |
0.6661 |
| AF-W5XHT4-F1-model_v4 | GT2 | 1 | 346 | 1 | 272 | 0.5849 |
0.6699 |
| AF-A0A5P5ZGK0-F1-model_v4 | GT2 | 1 | 346 | 1 | 272 | 0.584 |
0.6693 |
| A0A7D6V9C3 | GT2 | 1 | 312 | 3 | 282 | 0.5822 |
0.6605 |
| AF-A0A7D6V9C3-F1-model_v4 | GT2 | 1 | 312 | 3 | 282 | 0.5822 |
0.6605 |
| A0A2V4F1C2 | GT2 | 1 | 346 | 1 | 271 | 0.5799 |
0.6676 |
| AF-A0A3Q9WPZ8-F1-model_v4 | GT2 | 1 | 331 | 1 | 250 | 0.5777 |
0.6897 |
| AF-Q5E8H6-F1-model_v4 | GT2 | 1 | 344 | 1 | 270 | 0.5777 |
0.6653 |
| A0A3E3K4D4 | GT2 | 1 | 338 | 4 | 295 | 0.5769 |
0.6442 |
| AF-A0A2Z4BVJ7-F1-model_v4 | GT2 | 1 | 344 | 1 | 270 | 0.576 |
0.662 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QLC25233.1 | GT2 | 1 | 346 | 2 | 259 | 0.6051 |
0.7167 |
| BCM89438.1 | GT2 | 2 | 276 | 1 | 291 | 0.5979 |
0.7021 |
| A0A8A7K6J3 | GT2 | 6 | 313 | 1 | 236 | 0.596 |
0.7912 |
| A0A7L8S278 | GT2 | 4 | 346 | 4 | 271 | 0.5917 |
0.7038 |
| A0A2P1PVU2 | GT2 | 2 | 346 | 2 | 273 | 0.5915 |
0.6797 |
| A0A175AC26 | GT2 | 2 | 345 | 5 | 274 | 0.5823 |
0.6749 |
| A0A7D6V9C3 | GT2 | 1 | 312 | 3 | 282 | 0.5822 |
0.6605 |
| A0A2V4F1C2 | GT2 | 1 | 346 | 1 | 271 | 0.5799 |
0.6676 |
| A0A3E3K4D4 | GT2 | 1 | 338 | 4 | 295 | 0.5769 |
0.6442 |
| A0A0P0P194 | GT2 | 1 | 346 | 1 | 255 | 0.5767 |
0.7227 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1gq9-assembly1.cif.gz_B | 5 | 269 | 1 | 241 | 0.5689 |
0.6858 |
| 3pol-assembly1.cif.gz_A | 3 | 272 | 7 | 262 | 0.5495 |
0.6555 |
| 4xwi-assembly1.cif.gz_A | 3 | 269 | 1 | 252 | 0.5438 |
0.6461 |
| 5hea-assembly1.cif.gz_A | 2 | 319 | 1 | 256 | 0.535 |
0.6518 |
| 8b31-assembly1.cif.gz_A | 5 | 273 | 1 | 271 | 0.5233 |
0.6239 |
| 5tzi-assembly1.cif.gz_C | 5 | 315 | 1 | 258 | 0.4665 |
0.6188 |
| 7ui6-assembly1.cif.gz_A | 1 | 302 | 1 | 409 | 0.4162 |
0.6041 |
| 2z86-assembly1.cif.gz_A | 2 | 252 | 80 | 308 | 0.3869 |
0.7111 |
| 2z86-assembly2.cif.gz_C | 1 | 315 | 335 | 563 | 0.3835 |
0.7077 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71054-F1-model_v4 | 1 | 346 | 1 | 275 | 0.5724 |
0.6558 |
| AF-Q46635-F1-model_v4 | 6 | 345 | 1 | 266 | 0.5679 |
0.6576 |
| AF-B0SA58-F1-model_v4 | 3 | 285 | 1 | 246 | 0.5648 |
0.6765 |
| AF-A0LE62-F1-model_v4 | 5 | 274 | 1 | 250 | 0.5619 |
0.6683 |
| AF-Q03084-F1-model_v4 | 1 | 344 | 1 | 270 | 0.5616 |
0.6525 |
| AF-Q8RFA8-F1-model_v4 | 4 | 281 | 1 | 245 | 0.5609 |
0.6735 |
| AF-Q4KXC9-F1-model_v4 | 1 | 251 | 3 | 214 | 0.5608 |
0.7766 |
| AF-B0KF43-F1-model_v4 | 1 | 266 | 1 | 254 | 0.5582 |
0.6591 |
| AF-A1APF8-F1-model_v4 | 5 | 270 | 1 | 255 | 0.5571 |
0.6574 |
| AF-Q1ICZ9-F1-model_v4 | 1 | 266 | 1 | 254 | 0.5567 |
0.6576 |