PROTEIN: Rep_505_c_12_40
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Protein File & Metadata
Source:
Rep_505_c_12_40.pdb
Genome ID:
Protein ID:
Rep_505_c_12_40
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Protein Sequence
MKRILVWSIG FLYGLNLSAQ TTVWKGKTWE AYISDNGCLE QIIFKKSGRN DTVPFFREGK 60 HTGPSFYVAK EGKTMTAQWM PNGYRSYRAV IDAVECRMTY KDWHGQPALE VTLLNCGHVT 120 FQPEKAGLRL GIDTYMDKYP DWFGKYFPTL MRNEKTHFFG YLQTPSGQML GIVSPQPVAS 180 WSVEYNLGYQ DPAPHWFMGH RIESLNLDLL NTLPLPERHP QNLWKLEQGE SRSWTIALMD 240 IEKPDMFEET VRRVADIPML RLPQTVCTPG ERLSFEVLAD KADITVRNDR GQTLPTDIKK 300 QDGIYRVSCT LPEAGLYTVR ATEKSKVSEG VLSAHASWQW TLEQARRSAW KYHQKATSHI 360 ESWYGFHSAF LAARYFPEND LDNKLRQRFD YLFGLLHDMK KMTPKYYASR IQNTSGTIGM 420 LVDKYEAYSD VSDLEKASCL GDWLINTWQR EDGAYMNHGT VYTSVIYVAK SMLELTLAER 480 KAAARDIRWK EAAKRHYDSA KRAIDQLVAS KGDFKTEGEM TFEDGMISCS ALQIGMLGLM 540 QQDEQTRRHY TKAMLDILHS HDCLAQLRVP DARRRGGTMR YWEAQYDVEM LPNMFNSPHG 600 WSGWRAYATY YAYLLTGDER WLRETWNAMG AFSNLVNYRT GDLRWAFIVD PYLKVRQACS 660 ADTHVTEDSL SFGNPHPFLY DTRSFVIGEQ YVNMISDWQT VNSQDNDVHE VFKFMGEAML 720 TNAFIVERPD GTVAGYNCRV THRGNRLQVE ADEKQIVNLH CNLRNAFTVS FRGKEKQLEA 780 GYLGWAFGTD IYLE 794
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 18 | 794 | 27 | 879 | 0.704 |
0.772 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 21 | 737 | 1 | 663 | 0.7564 |
0.833 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 26 | 753 | 1 | 629 | 0.756 |
0.8513 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 16 | 758 | 28 | 716 | 0.7517 |
0.83 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 20 | 792 | 1 | 619 | 0.7485 |
0.8486 |
| E3QS34 | PL27 | 16 | 787 | 1 | 702 | 0.7475 |
0.8032 |
| AF-A0A0P0M2G6-F1-model_v4 | PL27 | 23 | 724 | 22 | 690 | 0.7462 |
0.8307 |
| AF-A0A413RT83-F1-model_v4 | PL27 | 23 | 738 | 22 | 690 | 0.7458 |
0.8303 |
| AF-A6L332-F1-model_v4 | PL27 | 23 | 738 | 22 | 690 | 0.7455 |
0.8301 |
| A0A174T7R5 | PL27 | 23 | 738 | 22 | 690 | 0.7452 |
0.8298 |
| AF-Q5AWT9-F1-model_v4 | PL27 | 6 | 739 | 10 | 724 | 0.7448 |
0.7992 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S0KVT5 | PL27 | 21 | 737 | 1 | 663 | 0.7564 |
0.833 |
| A0A5P8M7F3 | PL27 | 26 | 753 | 1 | 629 | 0.756 |
0.8513 |
| A0A6I5ZZU4 | PL27 | 16 | 758 | 28 | 716 | 0.7517 |
0.83 |
| F5Y9B7 | PL27 | 20 | 792 | 1 | 619 | 0.7485 |
0.8486 |
| E3QS34 | PL27 | 16 | 787 | 1 | 702 | 0.7475 |
0.8032 |
| A0A174T7R5 | PL27 | 23 | 738 | 22 | 690 | 0.7452 |
0.8298 |
| Q5AWT9 | PL27 | 6 | 739 | 10 | 724 | 0.7448 |
0.7992 |
| A0A416I060 | PL27 | 21 | 754 | 8 | 651 | 0.744 |
0.8342 |
| A0A3D9KEZ8 | PL27 | 20 | 722 | 1 | 693 | 0.7438 |
0.8027 |
| C7Q3H3 | PL27 | 17 | 752 | 9 | 680 | 0.7435 |
0.82 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 27 | 722 | 1 | 669 | 0.7436 |
0.8163 |
| 5nok-assembly1.cif.gz_A | 27 | 722 | 5 | 668 | 0.7379 |
0.8152 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.