PROTEIN: Rep_490_c_5_100
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Protein File & Metadata
Source:
Rep_490_c_5_100.pdb
Genome ID:
Protein ID:
Rep_490_c_5_100
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Protein Sequence
MQENTNKSLA VNTLALYIRL LVTAICGLFT TRFALEALGV VDYGLFSVIG SIISFIAIIN 60 TIMVSTSNRF IAVAIGKRDV GEANKQFNVC LIIHIVISFC TILFALPIGE WYIYHYLNYA 120 GDITNALMVF RFTIIASAVT FIGVPYNGLL SAKEKFIVFC VPDIISHILK LVVAYLIVSY 180 FENKLMIYSL SIAIFTAYPV VVYIIYCRKN YHEISHITFI RDKKCYKEII IFSAWVTYGA 240 IAYVGKAQGA AILVNAFFST VMNTALGIAN AINGIIVNFA QNVAQPIAPQ ITKSYAAGDK 300 DRSNYLLVLS TKLTFLTMFL VSSPFLVGTE WILQLWLGQV PDYAAMFTIL VIVDALIDSL 360 NSGIKNIIFA SGRIKMFQIA SSTLKMCAIV AAFIVLKIGA PAYSLLYAYI FFTVLVFFAN 420 QWVLNKTLNY DNAYLWKKSY IPSFLVVGLF CPCFFLKLLI PQFVAIVLSI LYLCILILLV 480 GLTKQERNYL YSIVSKKITK 500
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PAP8-F1-model_v4 | 1 | 430 | 1 | 433 | 0.8282 |
0.9111 |
| AF-P71616-F1-model_v4 | 1 | 430 | 3 | 434 | 0.8121 |
0.8952 |
| AF-V9H0I2-F1-model_v4 | 4 | 432 | 3 | 426 | 0.8104 |
0.8923 |
| AF-A0A0H3GGV5-F1-model_v4 | 4 | 431 | 5 | 434 | 0.8102 |
0.8965 |
| AF-Q8CWT9-F1-model_v4 | 2 | 496 | 1 | 469 | 0.8097 |
0.8555 |
| AF-Q8ZKH8-F1-model_v4 | 4 | 431 | 6 | 435 | 0.809 |
0.8978 |
| AF-Q9HUY9-F1-model_v4 | 3 | 431 | 11 | 441 | 0.8079 |
0.906 |
| AF-O25454-F1-model_v4 | 23 | 430 | 1 | 411 | 0.8067 |
0.9098 |
| AF-Q8DPQ6-F1-model_v4 | 1 | 432 | 1 | 446 | 0.7985 |
0.8908 |
| AF-Q8DNG1-F1-model_v4 | 1 | 434 | 3 | 447 | 0.7965 |
0.8883 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 494 | 3 | 508 | 0.6883 |
0.7333 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 493 | 36 | 545 | 0.6519 |
0.7121 |
| AF-F2NKF2-F1-model_v4 | GT4 | 3 | 489 | 1 | 490 | 0.6406 |
0.851 |
| WBL35586.1 | GT4 | 1 | 500 | 200 | 804 | 0.6224 |
0.7744 |
| QJC17489.1 | GT2 | 1 | 500 | 338 | 849 | 0.6191 |
0.7864 |
| A0A9W6NQN0 | GT2 | 1 | 430 | 15 | 420 | 0.6098 |
0.8695 |
| A0A1S9M4N4 | GT2 | 3 | 434 | 276 | 693 | 0.6009 |
0.8405 |
| AF-D7BDH0-F1-model_v4 | GT4 | 3 | 489 | 1 | 480 | 0.578 |
0.7753 |
| AF-A0A6P1FQ34-F1-model_v4 | GT4 | 1 | 500 | 2 | 487 | 0.5601 |
0.7394 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 496 | 1 | 585 | 0.5558 |
0.7261 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 494 | 3 | 508 | 0.6883 |
0.7333 |
| A0A160T2N7 | GT28 | 1 | 493 | 36 | 545 | 0.6519 |
0.7121 |
| F2NKF2 | GT4 | 3 | 489 | 1 | 490 | 0.6406 |
0.851 |
| WBL35586.1 | GT4 | 1 | 500 | 200 | 804 | 0.6224 |
0.7744 |
| QJC17489.1 | GT2 | 1 | 500 | 338 | 849 | 0.6191 |
0.7864 |
| A0A9W6NQN0 | GT2 | 1 | 430 | 15 | 420 | 0.6098 |
0.8695 |
| A0A1S9M4N4 | GT2 | 3 | 434 | 276 | 693 | 0.6009 |
0.8405 |
| D7BDH0 | GT4 | 3 | 489 | 1 | 480 | 0.578 |
0.7753 |
| A0A517Z2I8 | GT2 | 1 | 500 | 5 | 759 | 0.5734 |
0.7364 |
| A0A3Q9G719 | GT4 | 1 | 496 | 1 | 585 | 0.5558 |
0.7261 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4z3p-assembly1.cif.gz_A | 1 | 431 | 2 | 424 | 0.8009 |
0.8885 |
| 3vvo-assembly1.cif.gz_A | 1 | 432 | 2 | 443 | 0.8009 |
0.8888 |
| 6fv8-assembly1.cif.gz_B | 1 | 432 | 1 | 436 | 0.7977 |
0.8745 |
| 6ids-assembly1.cif.gz_A | 2 | 430 | 3 | 432 | 0.7937 |
0.8777 |
| 3w4t-assembly1.cif.gz_A | 1 | 432 | 2 | 444 | 0.7931 |
0.8801 |
| 6z70-assembly1.cif.gz_A | 1 | 432 | 2 | 444 | 0.7927 |
0.8769 |
| 6gwh-assembly1.cif.gz_A | 1 | 432 | 2 | 437 | 0.7918 |
0.8725 |
| 3vvs-assembly1.cif.gz_A | 1 | 432 | 2 | 442 | 0.7917 |
0.8766 |
| 6hfb-assembly3.cif.gz_C | 1 | 432 | 3 | 449 | 0.7902 |
0.8812 |
| 7php-assembly1.cif.gz_A | 4 | 431 | 7 | 446 | 0.7883 |
0.8899 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PJB9-F1-model_v4 | 1 | 497 | 1 | 533 | 0.8384 |
0.887 |
| AF-Q46378-F1-model_v4 | 1 | 498 | 1 | 533 | 0.8273 |
0.875 |
| AF-Q9Z7H5-F1-model_v4 | 1 | 497 | 1 | 536 | 0.8271 |
0.8836 |
| AF-Q6HLG9-F1-model_v4 | 1 | 432 | 1 | 447 | 0.8168 |
0.9099 |
| AF-Q81G28-F1-model_v4 | 1 | 432 | 1 | 447 | 0.8158 |
0.908 |
| AF-Q63DZ4-F1-model_v4 | 1 | 432 | 1 | 447 | 0.8151 |
0.9081 |
| AF-Q5KZL2-F1-model_v4 | 1 | 432 | 1 | 447 | 0.812 |
0.9067 |
| AF-O31855-F1-model_v4 | 1 | 432 | 1 | 447 | 0.8096 |
0.9018 |
| AF-Q81T85-F1-model_v4 | 1 | 432 | 1 | 447 | 0.809 |
0.902 |
| AF-Q8CUL5-F1-model_v4 | 1 | 432 | 1 | 447 | 0.8088 |
0.8967 |