PROTEIN: Rep_490_c_2_2851
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Protein File & Metadata
Source:
Rep_490_c_2_2851.pdb
Genome ID:
Protein ID:
Rep_490_c_2_2851
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Protein Sequence
MKKFKIEIIL MGVLAMIFAS CSDFFEPNND TTLNGDRYIK EGSELYSGFL GIITKIQAIG 60 DKAIYLTDMR GELLEPTENT PADLYSIYNY DDDLSGNTYA DPAKYYDVII ACNDYLQKAK 120 EYRDTHVTTV DDDDYRGLIS STVRLKTWTY LMLAKIYGQA IWFDDPMQSM KDIVSQTPKN 180 LSELVDECDK LLNTGFDGIN GTYNMSWNEW LDPANGATST NDEYKRWNMM VPGYFVLQAE 240 IALWKGDYQK AATTILGEMS RTFALAEYQG NVANIKYMRS GSYGSNYGQQ YDSEMPVLTA 300 AESVIMYDYK YNQQNSLLNH FDRSGSYMMR ASVPGSKRFE DITFNPSADA TAIKTSDARF 360 RAIQEIEKDV EYAIRKYRGF RKSGHSVAHD DTYIMIYHTS DLYFMAIEAL NNMGRFEPVS 420 VLMNTGVDPF YGAGVVLGEQ WQGLNCNWGL WTTLYAGFRR TYADNGVRGI LGLGKRDMWQ 480 TPEDIKEEIV AEQKLDGLSD EDKIKKHNDI ELVKEAFLEF PCEGKTYPLM IRVAKRWNDY 540 SFIADFVGQK YESDQAKQAE VKAKIMNGAY FVPWDLQGKS SSH 583
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414WUJ8 | GH16 | 20 | 580 | 31 | 877 | 0.5365 |
0.6753 |
| U6RU08 | PL8 | 10 | 583 | 31 | 949 | 0.4532 |
0.6906 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414WUJ8 | GH16 | 20 | 580 | 31 | 877 | 0.5365 |
0.6753 |
| U6RU08 | PL8 | 10 | 583 | 31 | 949 | 0.4532 |
0.6906 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3jq1-assembly1.cif.gz_A | 37 | 581 | 1 | 453 | 0.7387 |
0.8486 |
| 3jq1-assembly2.cif.gz_B | 37 | 581 | 1 | 455 | 0.7382 |
0.8465 |
| 3myv-assembly2.cif.gz_B | 39 | 581 | 1 | 431 | 0.7321 |
0.8642 |
| 3l22-assembly1.cif.gz_A | 37 | 581 | 1 | 424 | 0.7272 |
0.8555 |
| 3hdx-assembly1.cif.gz_A | 34 | 581 | 1 | 446 | 0.7203 |
0.8363 |
| 3mcx-assembly1.cif.gz_A | 40 | 581 | 1 | 451 | 0.7176 |
0.8257 |
| 3kez-assembly1.cif.gz_A | 36 | 581 | 1 | 437 | 0.7155 |
0.8377 |
| 7kv1-assembly2.cif.gz_B | 41 | 581 | 1 | 448 | 0.7125 |
0.823 |
| 7kv1-assembly1.cif.gz_A | 41 | 581 | 1 | 447 | 0.7123 |
0.8235 |
| 6gcz-assembly1.cif.gz_A | 39 | 581 | 1 | 453 | 0.7001 |
0.8035 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KN63-F1-model_v4 | 31 | 581 | 26 | 495 | 0.6956 |
0.8082 |
| AF-T2KPM5-F1-model_v4 | 23 | 581 | 33 | 494 | 0.6919 |
0.8154 |
| AF-T2KNB8-F1-model_v4 | 31 | 581 | 29 | 513 | 0.6865 |
0.7905 |
| AF-A7LXT5-F1-model_v4 | 29 | 581 | 30 | 532 | 0.6708 |
0.759 |
| AF-Q8A1G2-F1-model_v4 | 29 | 581 | 29 | 541 | 0.6443 |
0.7194 |