PROTEIN: Rep_481_c_15_8
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Protein File & Metadata
Source:
Rep_481_c_15_8.pdb
Genome ID:
Protein ID:
Rep_481_c_15_8
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Protein Sequence
MKRNIYCTGV WGSLVIAILL CSCRQSYFVM DMVHHNPGEA MTKSAFLNPS YLKANGYGAK 60 VFFLFEAAQF GIDWRDFDES LFPDTSEVGR WVAEKAEIIH AKYDAAKKEG LDVYCMLDML 120 VLPSKLVEKH RAELTNGKGK IDISKPYTQH CVRQLMKEMF DTYPQLDGLV IRTGETYLHD 180 APYYVGNHPV QTGMHDHVTL INLLREEVCE KRNKRLFYRT WDMGKLHSLP RHYLSVTDSV 240 KPHPNLCFSI KHTMTDFWRT GLTNPQMNYD GMDTYWLEES GRYGVPFNPC IGIGKHPQIV 300 EVQCQREYEG KAAHPNYIAK GVIDGFGEFE KAGIKKPYCL NHIKDNPLMK GIWTWSRGGG 360 WGGPYITNEF WLELNAHVLA AWANNPDCPE EELFDAFARK KGLPEAETEA FRRLCLLSEE 420 GVLKGQYSEQ GDIYVNWTRD DAVTGDFFLK GSFDRIIQKN KIDEYIQEKQ EAVRIWKEIE 480 RISRTLHFPS EELNHFVRVS STYGRIKYEF LAVAWEIMLR GYVAGKTGTP LDEKRMAANI 540 RRYDSLWEEW NKLSRENPDC PSLYKVTSSF FGGEVGIKST VDWYRR 586
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WDE98913.1 | GH0 | 13 | 578 | 99 | 710 | 0.6903 |
0.7945 |
| AF-A0A5S9IR15-F1-model_v4 | GH0 | 21 | 586 | 44 | 616 | 0.68 |
0.8325 |
| QRN95889.1 | GH0 | 21 | 586 | 52 | 627 | 0.6639 |
0.8279 |
| AF-A0A7L6BEL5-F1-model_v4 | GH0 | 6 | 586 | 75 | 726 | 0.6461 |
0.8255 |
| AF-A0A5Q0GW34-F1-model_v4 | GH0 | 14 | 586 | 116 | 729 | 0.6445 |
0.8242 |
| AF-A0A1C4YQM2-F1-model_v4 | GH0 | 10 | 586 | 89 | 745 | 0.6444 |
0.8314 |
| AF-A0A7R7DPC5-F1-model_v4 | GH0 | 14 | 586 | 87 | 712 | 0.6409 |
0.8251 |
| AF-A0A2S1TZA1-F1-model_v4 | GH67 | 21 | 528 | 42 | 577 | 0.6406 |
0.7458 |
| AF-A0A1C4Z1S6-F1-model_v4 | GH0 | 2 | 586 | 111 | 770 | 0.6403 |
0.8223 |
| AF-A0A1A8ZGE8-F1-model_v4 | GH0 | 10 | 586 | 94 | 742 | 0.6403 |
0.8277 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A290Q4E1 | GH138 | 8 | 586 | 16 | 694 | 0.638 |
0.7169 |
| A0A5J6SXV5 | GH163 | 15 | 585 | 64 | 619 | 0.6229 |
0.6876 |
| A0A140HJ28 | GH67 | 14 | 584 | 74 | 667 | 0.6155 |
0.6816 |
| A0A7T0RQE8 | GH67 | 11 | 569 | 92 | 704 | 0.6119 |
0.7098 |
| E4T1K8 | GH67 | 11 | 570 | 90 | 706 | 0.6118 |
0.7079 |
| A0A4V0ZHA3 | GH67 | 10 | 530 | 98 | 688 | 0.6116 |
0.7467 |
| A0A142ER82 | GH67 | 10 | 569 | 100 | 718 | 0.6098 |
0.71 |
| F4GLG9 | GH67 | 10 | 530 | 95 | 686 | 0.6086 |
0.7412 |
| F8F1B6 | GH67 | 10 | 540 | 85 | 684 | 0.6061 |
0.7256 |
| A0A7U4ND80 | GH67 | 11 | 569 | 111 | 724 | 0.6039 |
0.7089 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6hzg-assembly1.cif.gz_A | 18 | 586 | 53 | 687 | 0.6562 |
0.7432 |
| 1h41-assembly1.cif.gz_A | 11 | 579 | 82 | 700 | 0.621 |
0.7049 |
| 1l8n-assembly1.cif.gz_A-2 | 14 | 540 | 75 | 671 | 0.6123 |
0.7318 |
| 1mqq-assembly1.cif.gz_A-2 | 14 | 540 | 75 | 675 | 0.6111 |
0.7321 |
| 6hze-assembly2.cif.gz_B | 17 | 586 | 57 | 679 | 0.6027 |
0.7405 |
| 6hzf-assembly1.cif.gz_A | 18 | 586 | 48 | 682 | 0.5999 |
0.7393 |
| 5vvx-assembly1.cif.gz_C | 26 | 582 | 1 | 429 | 0.5555 |
0.6559 |
| 5vvv-assembly1.cif.gz_C | 26 | 583 | 1 | 422 | 0.5548 |
0.6578 |
| 5vvu-assembly1.cif.gz_C | 26 | 583 | 1 | 428 | 0.5547 |
0.6536 |
| 5un9-assembly1.cif.gz_B | 26 | 583 | 1 | 425 | 0.5529 |
0.6538 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B3PC73-F1-model_v4 | 11 | 579 | 106 | 732 | 0.6125 |
0.7084 |
| AF-O42814-F1-model_v4 | 11 | 585 | 103 | 831 | 0.596 |
0.7212 |
| AF-B0Y2K1-F1-model_v4 | 13 | 585 | 104 | 830 | 0.5934 |
0.72 |
| AF-Q4WW45-F1-model_v4 | 13 | 585 | 104 | 830 | 0.5934 |
0.7201 |
| AF-Q5AQZ4-F1-model_v4 | 13 | 585 | 104 | 837 | 0.5914 |
0.7198 |