PROTEIN: Rep_480_c_17_50
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Protein File & Metadata
Source:
Rep_480_c_17_50.pdb
Genome ID:
Protein ID:
Rep_480_c_17_50
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Protein Sequence
MNKIKNALII SLKFHPGHFS HLLASYRQME DLRYNPILWI HKNSSSFINR ELNIITNRGS 60 LPKTIDIALF LFPNPKNILE ILYLKIFRKS RVVYFFHEPL TKISTYRKAG FSLLNIFKLY 120 IGLFIDTIVV KFSDVIILPS NKAYQYYLEN RFYTNNKIHY MPLMYDEEDI TLIETKKRLY 180 FSYIGTIAPD HSFQEYLDFI SDAIKYEKIP NVKFLIATKS EFKASPELIN SSRVIIQQGR 240 ALSDLEINTF YAETIVVWNA YIRTTQSGVL AKSFMFGTPA IIMSHNLNEF TVNNQNVIAI 300 EDNKNYKQIE KAITEISDNF VYYSLNCRNT FKKIFYYKNY NRMFKNILNN I 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F0S0-F1-model_v4 | 2 | 351 | 1 | 346 | 0.7777 |
0.8112 |
| AF-A0A0H3GSJ8-F1-model_v4 | 2 | 351 | 1 | 350 | 0.7771 |
0.806 |
| AF-A4SH27-F1-model_v4 | 5 | 351 | 1 | 376 | 0.7689 |
0.8281 |
| AF-Q8DRG8-F1-model_v4 | 1 | 351 | 20 | 397 | 0.7633 |
0.8334 |
| AF-Q5F734-F1-model_v4 | 1 | 348 | 1 | 354 | 0.7615 |
0.7944 |
| AF-Q0P9C5-F1-model_v4 | 4 | 351 | 1 | 356 | 0.757 |
0.7948 |
| AF-O05083-F1-model_v4 | 4 | 348 | 1 | 353 | 0.7568 |
0.7959 |
| AF-Q5FAD9-F1-model_v4 | 5 | 351 | 1 | 354 | 0.7558 |
0.7906 |
| AF-Q59002-F1-model_v4 | 5 | 351 | 1 | 385 | 0.7546 |
0.8226 |
| AF-A0A5P3FXC6-F1-model_v4 | 1 | 351 | 5 | 342 | 0.7545 |
0.8098 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q0W4G3-F1-model_v4 | GT4 | 7 | 351 | 1 | 351 | 0.7826 |
0.8189 |
| AF-F6DPP0-F1-model_v4 | GT4 | 5 | 351 | 1 | 368 | 0.7777 |
0.8269 |
| AF-B8GDE8-F1-model_v4 | GT4 | 2 | 351 | 2 | 358 | 0.7752 |
0.8121 |
| AF-A0A250IU68-F1-model_v4 | GT4 | 4 | 351 | 1 | 331 | 0.7735 |
0.8195 |
| AF-A0A2S0KVH7-F1-model_v4 | GT4 | 5 | 351 | 1 | 360 | 0.7725 |
0.816 |
| AF-A0A347AHM6-F1-model_v4 | GT4 | 5 | 350 | 1 | 373 | 0.7724 |
0.8289 |
| AF-A0A0H4PI35-F1-model_v4 | GT4 | 2 | 351 | 1 | 372 | 0.7723 |
0.821 |
| AF-A0A4P7JSE6-F1-model_v4 | GT4 | 5 | 350 | 1 | 346 | 0.7723 |
0.8016 |
| AF-A5G3Z0-F1-model_v4 | GT4 | 1 | 351 | 5 | 371 | 0.7714 |
0.8319 |
| AF-A0A127PBL6-F1-model_v4 | GT4 | 1 | 351 | 4 | 361 | 0.7703 |
0.8094 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6B8JYH6 | GT4 | 3 | 351 | 1 | 343 | 0.7926 |
0.8259 |
| A0A2S2E322 | GT4 | 2 | 351 | 1 | 354 | 0.7877 |
0.8186 |
| Q0W4G3 | GT4 | 7 | 351 | 1 | 351 | 0.7826 |
0.8189 |
| QTE71030.1 | GT4 | 2 | 351 | 1 | 358 | 0.7819 |
0.8143 |
| A0A2R4MXS5 | GT4 | 2 | 351 | 1 | 373 | 0.7783 |
0.8349 |
| A0A0E3S983 | GT4 | 4 | 351 | 1 | 364 | 0.7781 |
0.8215 |
| A0A4P6VTQ6 | GT4 | 1 | 351 | 3 | 356 | 0.7777 |
0.8063 |
| UPO64707.1 | GT4 | 3 | 351 | 1 | 370 | 0.7772 |
0.824 |
| A1RUM3 | GT4 | 7 | 351 | 1 | 369 | 0.7761 |
0.83 |
| A0A1V0PTI0 | GT4 | 5 | 351 | 1 | 355 | 0.7754 |
0.8124 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly2.cif.gz_C | 4 | 351 | 1 | 369 | 0.7808 |
0.8294 |
| 3mbo-assembly3.cif.gz_E | 4 | 351 | 1 | 371 | 0.7757 |
0.8271 |
| 2jjm-assembly1.cif.gz_B | 4 | 351 | 1 | 358 | 0.7723 |
0.8082 |
| 3mbo-assembly1.cif.gz_A | 2 | 351 | 1 | 368 | 0.7704 |
0.8147 |
| 3mbo-assembly4.cif.gz_H | 4 | 351 | 1 | 365 | 0.7691 |
0.8151 |
| 6n1x-assembly1.cif.gz_A | 2 | 351 | 2 | 374 | 0.7664 |
0.8166 |
| 4xsr-assembly1.cif.gz_B | 4 | 351 | 1 | 364 | 0.7608 |
0.8027 |
| 6ejj-assembly1.cif.gz_A | 2 | 351 | 1 | 357 | 0.7602 |
0.7948 |
| 4xsu-assembly1.cif.gz_B | 4 | 351 | 1 | 367 | 0.7583 |
0.8032 |
| 4xsu-assembly1.cif.gz_A | 4 | 351 | 1 | 368 | 0.7582 |
0.8037 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42982-F1-model_v4 | 2 | 351 | 1 | 373 | 0.7707 |
0.8205 |
| AF-Q81ST7-F1-model_v4 | 2 | 351 | 1 | 372 | 0.7695 |
0.8225 |
| AF-Q8KQL6-F1-model_v4 | 5 | 351 | 1 | 328 | 0.761 |
0.811 |
| AF-Q48453-F1-model_v4 | 5 | 351 | 1 | 358 | 0.7582 |
0.7988 |
| AF-Q0P9C5-F1-model_v4 | 4 | 351 | 1 | 356 | 0.757 |
0.7948 |
| AF-Q46634-F1-model_v4 | 4 | 349 | 1 | 351 | 0.757 |
0.7918 |
| AF-O05083-F1-model_v4 | 4 | 348 | 1 | 353 | 0.7568 |
0.7959 |
| AF-Q59002-F1-model_v4 | 5 | 351 | 1 | 385 | 0.7546 |
0.8226 |
| AF-P54490-F1-model_v4 | 5 | 351 | 1 | 352 | 0.7544 |
0.7932 |
| AF-B8HCF8-F1-model_v4 | 2 | 351 | 2 | 405 | 0.7541 |
0.8415 |