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PROTEIN: Rep_476_c_179_32

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Protein File & Metadata
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Source:
Rep_476_c_179_32.pdb
Genome ID:
Rep_476
Protein ID:
Rep_476_c_179_32

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKNILYTFA   ALGFCSVLAG   SCIAEDLGVG   NIKQEENANS   DWNKTRSVEV   HFLSALNDAN 60
IGETDAIVNH   INALGEDCSI   GVIDRADVSG   GSNVATHISF   ATSRFPGYAL   NKVVKNGNGI 120
ATEGSLILYN   HKNNAEEGFK   VSNDCFIKFI   SIMCKSMVKE   NQKDILVPFA   TARFSSKEQI 180
NAAKSVLGTV   VDSRHNGVLI   GTVKSNLVED   LKSVAESISN   VKFSQADIAA   GEYAIFMVAD 240
KSWVLRETTT   NSVSGNVKDY   CLAIEPGVE 269
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GLT2-F1-model_v4 39 266 1 253 0.6518 0.7655
AF-P0AAW1-F1-model_v4 34 266 3 253 0.6475 0.7449
AF-Q8ZQP3-F1-model_v4 32 266 3 252 0.6432 0.7337
AF-Q32I62-F1-model_v4 43 266 5 253 0.6426 0.7662
AF-Q9D7J6-F1-model_v4 43 269 33 295 0.5725 0.7395
AF-Q24239-F1-model_v4 10 267 10 354 0.5625 0.681
AF-A0A044TEY5-F1-model_v4 29 265 72 324 0.553 0.696
AF-A0A077YZ15-F1-model_v4 43 268 33 343 0.5484 0.7443
AF-Q3T1H5-F1-model_v4 44 268 116 366 0.5376 0.7428
AF-Q54UJ8-F1-model_v4 44 269 49 343 0.537 0.7199
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
H2KAC3 CBM92 1 267 46 497 0.5135 0.6809
AF-A0A7L4Y2Z3-F1-model_v4 CBM92 1 269 43 497 0.5115 0.6743
USK35920.1 CBM32 42 269 36 303 0.5034 0.7348
WGR73306.1 CBM13 44 269 28 413 0.4948 0.7715
UDQ97408.1 CBM51 34 269 29 296 0.4824 0.6907
AF-A0A517N113-F1-model_v4 GH16_3 43 267 262 521 0.4737 0.7407
B1C4V7 CBM32 43 269 185 421 0.47 0.7621
AF-A4Z1D8-F1-model_v4 CBM13 30 269 22 288 0.449 0.6824
AF-A0A5Q2M9X7-F1-model_v4 GH184 39 269 38 300 0.4476 0.7316
UUW99060.1 GH184 14 269 56 473 0.4461 0.6695
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
APR87037.1 CBM48 43 268 96 352 0.5764 0.7813
A0A7Y6F907 CBM92 1 269 46 479 0.5192 0.6758
H2KAC3 CBM92 1 267 46 497 0.5135 0.6809
A0A7L4Y2Z3 CBM92 1 269 43 497 0.5115 0.6743
USK35920.1 CBM32 42 269 36 303 0.5034 0.7348
WGR73306.1 CBM13 44 269 28 413 0.4948 0.7715
A0A7D5YD42 CBM13 42 269 78 345 0.4898 0.7392
UDQ97408.1 CBM51 34 269 29 296 0.4824 0.6907
A0A517N113 GH16_3 43 267 262 521 0.4737 0.7407
B1C4V7 CBM32 43 269 185 421 0.47 0.7621
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4gyz-assembly4.cif.gz_D 46 268 1 238 0.6343 0.7381
3teb-assembly1.cif.gz_A 47 266 1 258 0.627 0.7661
3teb-assembly2.cif.gz_B 47 266 1 264 0.6214 0.7669
5j3s-assembly1.cif.gz_A 45 265 1 236 0.6166 0.7208
3mpr-assembly1.cif.gz_B 30 268 1 271 0.6159 0.714
4fva-assembly4.cif.gz_D 32 266 1 248 0.608 0.6903
4fva-assembly1.cif.gz_A 32 266 1 249 0.6079 0.6912
3ngn-assembly1.cif.gz_A 40 268 9 324 0.5826 0.7562
3ngq-assembly1.cif.gz_A 40 269 9 335 0.5774 0.7552
3ngo-assembly1.cif.gz_A 40 268 9 337 0.5744 0.7569
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0AAW3-F1-model_v4 34 266 2 253 0.6494 0.7473
AF-P0AAW1-F1-model_v4 34 266 3 253 0.6475 0.7449
AF-P0AAW4-F1-model_v4 43 266 5 253 0.6443 0.768
AF-P0AAW2-F1-model_v4 43 266 5 253 0.6437 0.7673
AF-Q9D7J6-F1-model_v4 43 269 33 295 0.5725 0.7395
AF-Q24239-F1-model_v4 10 267 10 354 0.5625 0.681
AF-Q3T1H5-F1-model_v4 44 268 116 366 0.5376 0.7428
AF-Q9LS39-F1-model_v4 9 269 10 448 0.5358 0.6994
AF-Q9JJX7-F1-model_v4 44 268 120 370 0.5354 0.7429
AF-Q6IR85-F1-model_v4 40 269 173 537 0.4875 0.7601
Download Full SwissProt Results