PROTEIN: Rep_460_c_7_34
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Protein File & Metadata
Source:
Rep_460_c_7_34.pdb
Genome ID:
Protein ID:
Rep_460_c_7_34
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Protein Sequence
MLGWLIITNI NSEFLVFIFV LFQYIFLFFF GGLCLSVVLD PGNVLFGIKE HLFILSFITG 60 AITIKRYPSL ILIIYIIVGL LIPVYGLLVG NLLGDYFSVE YALMYLKAFM FLSLILIGHK 120 YGLYISDIFS VITLLLIPIT IVIWYMVDSF SVEQSEIYPQ EIVVVSRRAF GPLLIDPVVF 180 YKTSPLLVFG LSFLCFKKQS SLTLLLLILG FWVMFISGTR ANLISVTVIY IIGIYNCVKE 240 NQRLKNLFIL ISIFLVFVFF PYLLTEVFFN SEESSLITKQ SLIDSYLLYW NENPLKFLLG 300 SGLGAGMATD VRGVEYIMEP TYFEIVRFWG IINMPFTVFF LLLLPICFFM KSQRSTLFPK 360 YKYVFIAYLL YVFVEIPSNP LLLSSTGMIV YVIALSSSYY LYKYSHSHD 409
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 4 | 409 | 1 | 395 | 0.7109 |
0.7539 |
| AF-A0A0H3H4H7-F1-model_v4 | 11 | 408 | 2 | 389 | 0.7083 |
0.7502 |
| AF-Q9I1M9-F1-model_v4 | 21 | 409 | 39 | 459 | 0.6561 |
0.7583 |
| AF-X8F0V5-F1-model_v4 | 21 | 408 | 39 | 460 | 0.6468 |
0.7492 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 16 | 409 | 1 | 404 | 0.6484 |
0.7045 |
| AF-D2IX70-F1-model_v4 | GT1 | 44 | 405 | 118 | 499 | 0.5958 |
0.7489 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 18 | 409 | 17 | 448 | 0.5891 |
0.7987 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 18 | 409 | 1 | 507 | 0.5783 |
0.754 |
| AF-D5MJ04-F1-model_v4 | GT9 | 3 | 409 | 6 | 418 | 0.5587 |
0.739 |
| AF-R4KL74-F1-model_v4 | GT4 | 10 | 409 | 2 | 584 | 0.5232 |
0.7272 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 24 | 407 | 6 | 408 | 0.6614 |
0.7244 |
| A2S058 | GH39 | 16 | 409 | 1 | 404 | 0.6484 |
0.7045 |
| D2IX70 | GT1 | 44 | 405 | 118 | 499 | 0.5958 |
0.7489 |
| A0A517MXC4 | GT26 | 18 | 409 | 17 | 448 | 0.5891 |
0.7987 |
| D5MJ04 | GT9 | 3 | 409 | 6 | 418 | 0.5587 |
0.739 |
| D9S8K7 | GT4 | 7 | 409 | 1 | 789 | 0.5472 |
0.7357 |
| R4KL74 | GT4 | 10 | 409 | 2 | 584 | 0.5232 |
0.7272 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 22 | 409 | 1 | 377 | 0.7452 |
0.8011 |
| AF-Q9HUG6-F1-model_v4 | 4 | 409 | 1 | 395 | 0.7109 |
0.7539 |
| AF-Q6FFS6-F1-model_v4 | 1 | 406 | 2 | 425 | 0.6166 |
0.7328 |