PROTEIN: Rep_460_c_65_6
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Protein File & Metadata
Source:
Rep_460_c_65_6.pdb
Genome ID:
Protein ID:
Rep_460_c_65_6
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Protein Sequence
MKTWKDNFEV SKKHYMDWWN QKGVVLTMWE HLDKDGSPHE AVQAPTPAKD MNQFWFDPEW 60 RSEYLHYKMS RYSYKADILP VANTQLGPGS LGAILGADLE GREDTIWIRD KKDFDGNIVF 120 NEDNKWWKLH LELLAKCKEK ARGNYLIGCP DLVEGLDVLA SLKGSDNVLM DLMIDPDTTL 180 HQLKEINKAY FKAFDRIYEI INEDGEMAFC YFSIWGPGKV SKLQCDISIM ISEDDFRTFA 240 LPFLREQCDY IDYTLYHLDG VDAMRHLDAV LELENLNAVQ WTPGVGQPQG GDARWYGLYK 300 KILAAGKSVM ANWVTLDELK PLLDNVGNQG LNIQIDFKSE KEIDEALKII DSF 353
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32AH0-F1-model_v4 | 1 | 353 | 1 | 352 | 0.6914 |
0.7196 |
| AF-Q5A5N0-F1-model_v4 | 1 | 353 | 4 | 361 | 0.689 |
0.7223 |
| AF-U7PS69-F1-model_v4 | 1 | 352 | 5 | 371 | 0.6879 |
0.7302 |
| AF-G4VSS2-F1-model_v4 | 1 | 353 | 5 | 362 | 0.6851 |
0.7193 |
| AF-A0A175VUB7-F1-model_v4 | 1 | 353 | 6 | 372 | 0.6844 |
0.7257 |
| AF-A0A1C1CI81-F1-model_v4 | 1 | 351 | 5 | 363 | 0.6834 |
0.7208 |
| AF-C1GQK4-F1-model_v4 | 1 | 352 | 5 | 365 | 0.6831 |
0.7207 |
| AF-P32362-F1-model_v4 | 1 | 353 | 8 | 362 | 0.6825 |
0.7169 |
| AF-P06132-F1-model_v4 | 1 | 353 | 5 | 365 | 0.6805 |
0.7173 |
| AF-Q9V595-F1-model_v4 | 1 | 350 | 7 | 356 | 0.6801 |
0.7137 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2inf-assembly2.cif.gz_D | 6 | 353 | 1 | 342 | 0.692 |
0.7289 |
| 4zr8-assembly1.cif.gz_B | 1 | 353 | 1 | 352 | 0.6905 |
0.7182 |
| 2q6z-assembly1.cif.gz_A | 1 | 353 | 1 | 355 | 0.6895 |
0.7177 |
| 3gw0-assembly1.cif.gz_A-2 | 1 | 353 | 1 | 355 | 0.6888 |
0.7162 |
| 3gw3-assembly1.cif.gz_A-2 | 1 | 353 | 2 | 356 | 0.6887 |
0.7171 |
| 1j93-assembly1.cif.gz_A-2 | 9 | 353 | 1 | 343 | 0.6886 |
0.7219 |
| 1jpk-assembly1.cif.gz_A-2 | 1 | 353 | 2 | 356 | 0.6873 |
0.7165 |
| 4exq-assembly1.cif.gz_A | 1 | 353 | 4 | 356 | 0.6787 |
0.708 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5SKP2-F1-model_v4 | 1 | 351 | 1 | 341 | 0.6987 |
0.7351 |
| AF-Q11X05-F1-model_v4 | 1 | 353 | 1 | 344 | 0.6969 |
0.7311 |
| AF-Q2GCG4-F1-model_v4 | 9 | 350 | 1 | 324 | 0.6966 |
0.7501 |
| AF-A6GVN8-F1-model_v4 | 1 | 353 | 1 | 341 | 0.6963 |
0.733 |
| AF-A8F0B3-F1-model_v4 | 9 | 353 | 1 | 339 | 0.6954 |
0.733 |
| AF-A7Z323-F1-model_v4 | 2 | 353 | 2 | 347 | 0.6927 |
0.7306 |
| AF-Q1D1F0-F1-model_v4 | 8 | 353 | 1 | 342 | 0.6923 |
0.7327 |
| AF-Q2NWR2-F1-model_v4 | 1 | 353 | 1 | 352 | 0.692 |
0.7201 |
| AF-Q1ITV2-F1-model_v4 | 1 | 353 | 1 | 346 | 0.6889 |
0.7254 |
| AF-Q8PUA8-F1-model_v4 | 7 | 353 | 4 | 338 | 0.6873 |
0.7568 |