PROTEIN: Rep_46_c_17_22
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Protein File & Metadata
Source:
Rep_46_c_17_22.pdb
Genome ID:
Protein ID:
Rep_46_c_17_22
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Protein Sequence
MKKFFFLASV AMVALSLNAQ DLLLEEYFEY EPGTNLITDT VTASDNIDGV TGWSTVSNKN 60 SGLTRFTITD APLTYDGYAG SGMGNALLFT PQSQSGQSVF KNWSHGITND TTIYIAFMLQ 120 FPKQSVNYPG SDYFFGIKME PAASSSNFAG RLYAAVEAMD EVTGTPFTGQ EISFGINKSS 180 DGQAVWSNPE EEPFFTFDQT YLIVYKYHVG VINGATAAEE QGNYDDESWL YVNPVLSAEP 240 AEATLHQKDP KGKDAFRLSS SGKEMGSLRG FYLRGGEPGK ANAIAPYIID GIRVGYSWES 300 VVGEQTPISN AQVLAPATKV IENGQVLIRR GENTYNLLGT QL 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D6FV58-F1-model_v4 | 20 | 300 | 27 | 254 | 0.3112 |
0.6939 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UXX79901.1 | PL14_3 | 1 | 300 | 6 | 265 | 0.6148 |
0.7265 |
| AF-A0A068QQU0-F1-model_v4 | PL14 | 17 | 303 | 11 | 259 | 0.6144 |
0.7413 |
| AF-A0A0B6X837-F1-model_v4 | PL14_3 | 17 | 303 | 11 | 259 | 0.6135 |
0.742 |
| AF-A0A1M5SI30-F1-model_v4 | PL20 | 18 | 307 | 22 | 242 | 0.6052 |
0.7864 |
| AF-D7C2X0-F1-model_v4 | PL20 | 18 | 307 | 25 | 244 | 0.6002 |
0.7859 |
| AF-Q2GUL3-F1-model_v4 | PL20 | 17 | 305 | 16 | 250 | 0.5972 |
0.7463 |
| AF-H8MSH9-F1-model_v4 | PL20 | 18 | 305 | 21 | 255 | 0.5901 |
0.7442 |
| AF-A0A410RTN4-F1-model_v4 | PL20 | 18 | 305 | 21 | 255 | 0.59 |
0.7446 |
| AF-E3FZS0-F1-model_v4 | PL20 | 18 | 305 | 21 | 256 | 0.5898 |
0.7429 |
| AF-A0A7D4XGN4-F1-model_v4 | PL20 | 18 | 305 | 21 | 255 | 0.5895 |
0.744 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UXX79901.1 | PL14_3 | 1 | 300 | 6 | 265 | 0.6148 |
0.7265 |
| A0A0B6X837 | PL14_3 | 17 | 303 | 11 | 259 | 0.6135 |
0.742 |
| A0A517NTW7 | PL14 | 21 | 295 | 8 | 243 | 0.5974 |
0.7329 |
| A0A2H4SE99 | PL20 | 14 | 305 | 14 | 258 | 0.5936 |
0.7261 |
| A0A5B7TMX9 | PL14 | 13 | 297 | 22 | 266 | 0.5912 |
0.735 |
| K3VJI1 | PL20 | 11 | 305 | 12 | 258 | 0.5867 |
0.7271 |
| A0A6G7XLG1 | PL14 | 17 | 300 | 33 | 284 | 0.5821 |
0.7257 |
| AVF39645.1 | PL14 | 16 | 297 | 25 | 270 | 0.5818 |
0.7344 |
| A0A2Z2NSL1 | PL14 | 18 | 298 | 40 | 290 | 0.5799 |
0.7399 |
| A0A5C5Y0M4 | PL14 | 18 | 300 | 37 | 283 | 0.5786 |
0.7346 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2zzj-assembly1.cif.gz_A | 20 | 305 | 1 | 238 | 0.6022 |
0.7272 |
| 6kzk-assembly3.cif.gz_C | 21 | 297 | 3 | 240 | 0.5912 |
0.7183 |
| 6kcv-assembly3.cif.gz_C | 21 | 297 | 3 | 240 | 0.5893 |
0.7197 |
| 6kcw-assembly1.cif.gz_A | 21 | 297 | 3 | 240 | 0.5863 |
0.7167 |
| 3gne-assembly2.cif.gz_B | 20 | 297 | 1 | 242 | 0.5762 |
0.6918 |
| 5hcf-assembly1.cif.gz_A | 21 | 307 | 1 | 242 | 0.5581 |
0.6953 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.