PROTEIN: Rep_439_c_4_1228
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Protein File & Metadata
Source:
Rep_439_c_4_1228.pdb
Genome ID:
Protein ID:
Rep_439_c_4_1228
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Protein Sequence
MKKTLLIASL GLLSMNLQTQ AEELHTWTAK ITGVTSAEDL YLQAPVCVDN AGSTYTTGQF 60 TEAITIGSTT LEPVANSAYL AKYNADGTAA WAIGLSGAAT ITSVTTDESN NVYIAGTFTD 120 VVKVGSTDGK TQEIKGAEGA DKTTSFIASY NANGELQAVR SFQAQVNAEV ANSGMYEVID 180 GYPYISIGHI EASNGKIYAS ATHTGDVSID DMKWNGMYLN VFDFMYSDLE SGGIFALNAT 240 DLKGATSVAH IGVSEQLQYT QMGFENLNFT VDNGTVYLCF VANGKIKYDA AGKSEEITLT 300 YDDLGSFEHA YIVSSIKDAT VNTKTFHAPA HTESAAYNRI GTLKADDKNL YIGGTFFQQL 360 AFNNEQTHTD GTDLFVAALN KETLELQWSN VSGLSEGDGK YFSENFNTMT VNNGVVSVYG 420 YVLQDQNNEK KITSALEYSF AGSGATNENA TVLITGADRK GETSALRSID TESHEATLSV 480 SAPTTGIQNV PALETQRVGN TFFFDQATDV QIYDLQGRLL KQAQKVTSVN IDNLQQGIYV 540 LSNGKASVKV QK 552
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1MZC1-F1-model_v4 | 9 | 527 | 152 | 487 | 0.4974 |
0.7497 |
| AF-A0A2R8Q7Z8-F1-model_v4 | 4 | 491 | 59 | 589 | 0.4512 |
0.5338 |
| AF-A0A1C1CYK3-F1-model_v4 | 7 | 528 | 104 | 658 | 0.445 |
0.5267 |
| AF-Q8VBV4-F1-model_v4 | 1 | 491 | 76 | 710 | 0.4291 |
0.5432 |
| AF-D3Z902-F1-model_v4 | 1 | 491 | 202 | 713 | 0.4253 |
0.5404 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6P1M3X8-F1-model_v4 | GH0 | 17 | 483 | 9 | 386 | 0.5558 |
0.6811 |
| AF-A0A7G7GAW7-F1-model_v4 | CBM35 | 24 | 545 | 40 | 534 | 0.5318 |
0.6955 |
| AF-H8MJ23-F1-model_v4 | CBM0 | 17 | 483 | 59 | 808 | 0.5137 |
0.7178 |
| QRR00887.1 | CBM57 | 18 | 552 | 20 | 883 | 0.509 |
0.6505 |
| AF-A0A250J984-F1-model_v4 | CBM0 | 4 | 458 | 108 | 840 | 0.4817 |
0.698 |
| QRQ99512.1 | CBM57 | 24 | 551 | 47 | 863 | 0.4704 |
0.6022 |
| QRR01391.1 | CBM57 | 18 | 547 | 19 | 615 | 0.468 |
0.6844 |
| AF-A0A5B8MTK6-F1-model_v4 | GH33 | 26 | 484 | 87 | 520 | 0.4648 |
0.5761 |
| QRR00777.1 | CBM57 | 3 | 483 | 11 | 471 | 0.4632 |
0.7302 |
| QRR02444.1 | CBM57 | 21 | 483 | 23 | 485 | 0.4264 |
0.646 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QQO26016.1 | PL42 | 21 | 484 | 1 | 414 | 0.5985 |
0.7102 |
| A0A6M4G5Q2 | PL42 | 7 | 483 | 47 | 472 | 0.5759 |
0.6936 |
| A0A7G7GAW7 | CBM35 | 24 | 545 | 40 | 534 | 0.5318 |
0.6955 |
| ULL14878.1 | GH33 | 13 | 483 | 25 | 393 | 0.5237 |
0.6614 |
| QRR01429.1 | CBM57 | 21 | 539 | 23 | 777 | 0.5183 |
0.6747 |
| A0A1T5G611 | PL42 | 23 | 483 | 15 | 435 | 0.5093 |
0.6032 |
| QRR00887.1 | CBM57 | 18 | 552 | 20 | 883 | 0.509 |
0.6505 |
| QRQ99512.1 | CBM57 | 24 | 551 | 47 | 863 | 0.4704 |
0.6022 |
| QRR01391.1 | CBM57 | 18 | 547 | 19 | 615 | 0.468 |
0.6844 |
| A0A5B8MTK6 | GH33 | 26 | 484 | 87 | 520 | 0.4648 |
0.5761 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7esl-assembly1.cif.gz_A | 19 | 484 | 1 | 418 | 0.6 |
0.6954 |
| 7esk-assembly1.cif.gz_A | 21 | 484 | 1 | 418 | 0.5999 |
0.6959 |
| 7fh7-assembly1.cif.gz_A | 27 | 483 | 240 | 644 | 0.5181 |
0.7528 |
| 3mks-assembly1.cif.gz_B | 10 | 483 | 17 | 444 | 0.5095 |
0.5962 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8VBV4-F1-model_v4 | 1 | 491 | 76 | 710 | 0.4291 |
0.5432 |
| AF-F1MNN4-F1-model_v4 | 4 | 491 | 81 | 706 | 0.4265 |
0.5425 |
| AF-D3Z902-F1-model_v4 | 1 | 491 | 202 | 713 | 0.4253 |
0.5404 |