PROTEIN: Rep_427_c_1_100
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Protein File & Metadata
Source:
Rep_427_c_1_100.pdb
Genome ID:
Protein ID:
Rep_427_c_1_100
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Protein Sequence
MRNKVPVLFI IFNRPELSLE TFRAIKEYQP NVLYIAADGP RSWIDGEAEI CAYTRQSILE 60 QIDWNCDVHK LFRDKNIGCG LGPSSGISWM FEQEKYGVII EDDCTPSSDF FRFCEELLPK 120 YADCYQVMQI NGFNPATKRT IGDSYSFSRY PKIWGWATWK RAWKDFDIKM SVWHDYKKSN 180 KIWKQFPVLE GFVHRYIWER SFRELNRTER PNFWDIPWSI TIFSRDGLCI VPDVNMVVNT 240 GEGVNATNCI IVDPNISKLK YGKIEFPLIH PGKIELTKET NQWDQKDYMN RRKSLLKQKI 300 KRFFKLNTLN IWAR 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4DMC0-F1-model_v4 | 2 | 286 | 65 | 367 | 0.6456 |
0.7888 |
| AF-Q4D3G6-F1-model_v4 | 1 | 286 | 61 | 367 | 0.6455 |
0.7867 |
| AF-A0A3P7DV18-F1-model_v4 | 1 | 281 | 42 | 301 | 0.6391 |
0.7716 |
| AF-A0A3P7Q5X9-F1-model_v4 | 1 | 293 | 30 | 346 | 0.6168 |
0.7093 |
| AF-A0A044SGH9-F1-model_v4 | 1 | 312 | 8 | 409 | 0.6091 |
0.7159 |
| AF-A0A044SYE9-F1-model_v4 | 1 | 300 | 42 | 397 | 0.5961 |
0.7049 |
| AF-A0A0K0ETJ8-F1-model_v4 | 1 | 313 | 31 | 431 | 0.5866 |
0.7008 |
| AF-Q32EF9-F1-model_v4 | 2 | 310 | 3 | 280 | 0.5863 |
0.6664 |
| AF-G5EBG7-F1-model_v4 | 1 | 313 | 67 | 453 | 0.5768 |
0.7022 |
| AF-A0A0K0JHB5-F1-model_v4 | 3 | 293 | 75 | 383 | 0.5715 |
0.7086 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QWE08948.1 | GT0 | 1 | 305 | 2 | 301 | 0.8923 |
0.9321 |
| AF-A4SVL4-F1-model_v4 | GT0 | 1 | 301 | 2 | 297 | 0.892 |
0.9392 |
| AF-C6W1E6-F1-model_v4 | GT0 | 1 | 314 | 2 | 307 | 0.8917 |
0.9187 |
| AF-F5YQA6-F1-model_v4 | GT0 | 2 | 309 | 1 | 303 | 0.8897 |
0.925 |
| AF-A1AXF1-F1-model_v4 | GT0 | 1 | 311 | 9 | 314 | 0.886 |
0.9232 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 3 | 303 | 1 | 297 | 0.885 |
0.9374 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 3 | 300 | 1 | 294 | 0.883 |
0.9445 |
| AF-A0A1X9LFJ6-F1-model_v4 | GT0 | 1 | 314 | 4 | 312 | 0.8828 |
0.9085 |
| AF-A0A2L2N2E5-F1-model_v4 | GT0 | 3 | 300 | 1 | 294 | 0.879 |
0.9403 |
| AF-A0A2L2NV30-F1-model_v4 | GT0 | 3 | 300 | 1 | 294 | 0.8787 |
0.9405 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 1 | 303 | 3 | 299 | 0.8214 |
0.8761 |
| WBV42548.1 | GT13 | 2 | 296 | 11 | 308 | 0.6689 |
0.7252 |
| R5FYV9 | GT2 | 1 | 305 | 289 | 585 | 0.6315 |
0.8758 |
| C1EGW4 | GT13 | 5 | 293 | 1 | 312 | 0.614 |
0.7042 |
| A0A6A1QZM2 | GT2 | 1 | 305 | 1 | 260 | 0.6124 |
0.6886 |
| A0A9E9LT15 | GT2 | 1 | 308 | 1 | 272 | 0.6076 |
0.6701 |
| A0A1W6MG82 | GT2 | 1 | 312 | 1 | 287 | 0.6049 |
0.6518 |
| A0A1H1YMQ5 | GT2 | 1 | 310 | 1 | 265 | 0.6026 |
0.6963 |
| QWD92039.1 | GT2 | 1 | 302 | 1 | 269 | 0.6017 |
0.6673 |
| UBM60722.1 | GT2 | 1 | 301 | 2 | 236 | 0.6015 |
0.7438 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 3 | 293 | 1 | 305 | 0.6168 |
0.7051 |
| 1fo8-assembly1.cif.gz_A | 2 | 292 | 1 | 293 | 0.5965 |
0.6713 |
| 5ggi-assembly1.cif.gz_A | 1 | 293 | 42 | 351 | 0.5869 |
0.7087 |
| 5z8b-assembly1.cif.gz_A | 4 | 258 | 1 | 209 | 0.5685 |
0.7013 |
| 1h7l-assembly1.cif.gz_A | 3 | 292 | 1 | 230 | 0.5599 |
0.6746 |
| 1on8-assembly1.cif.gz_B | 2 | 280 | 2 | 250 | 0.5496 |
0.6474 |
| 1on8-assembly1.cif.gz_A | 2 | 281 | 2 | 254 | 0.5495 |
0.641 |
| 5vcr-assembly1.cif.gz_A | 3 | 292 | 33 | 331 | 0.5485 |
0.6373 |
| 5vcs-assembly1.cif.gz_B | 3 | 295 | 30 | 304 | 0.5455 |
0.6419 |
| 1on6-assembly1.cif.gz_B | 1 | 280 | 1 | 245 | 0.541 |
0.6406 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q11068-F1-model_v4 | 1 | 299 | 88 | 449 | 0.5655 |
0.7048 |
| AF-Q09325-F1-model_v4 | 1 | 293 | 104 | 410 | 0.557 |
0.7074 |
| AF-P26572-F1-model_v4 | 1 | 293 | 102 | 408 | 0.5568 |
0.7059 |
| AF-P27115-F1-model_v4 | 1 | 293 | 104 | 410 | 0.5565 |
0.7067 |
| AF-P27808-F1-model_v4 | 1 | 293 | 104 | 410 | 0.5562 |
0.7063 |
| AF-Q9XGM8-F1-model_v4 | 1 | 293 | 100 | 406 | 0.5552 |
0.7031 |
| AF-D4GU63-F1-model_v4 | 1 | 307 | 14 | 287 | 0.5295 |
0.6125 |
| AF-Q9C975-F1-model_v4 | 2 | 280 | 45 | 306 | 0.5201 |
0.6454 |
| AF-P42407-F1-model_v4 | 3 | 261 | 1 | 263 | 0.5139 |
0.596 |
| AF-Q5XIN7-F1-model_v4 | 1 | 314 | 295 | 660 | 0.5035 |
0.6876 |