PROTEIN: Rep_410_c_56_20
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Protein File & Metadata
Source:
Rep_410_c_56_20.pdb
Genome ID:
Protein ID:
Rep_410_c_56_20
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Protein Sequence
MSETDKRLVL LTHYGDRPLS AIGEWALANG YNLEQISITP VEKKDFLSKK DLLWDFCKAV 60 FKWGSKAQTF RNKKLYCTGG QIPAMAICKI FGKVLGDYHL YIHNFYIHNL GKNTIIKKIL 120 SFLLNNSRLT IIAQSQGEIN YFRSLSPRPA IEFLPYCSDM QPTKFPNPTE YNLPDEYIFT 180 GGYTNRDYNL MVRLAERFPH ENFVFITSSL NKLSIPENIK NITLLRNLPK SHFETILANS 240 KIVVVPLKED VGASGQMLSL SALRNGKPTV YTDLSVINYY FCDGAGIGVP INDLESMSAA 300 LHSLLNEPEL MKKTGEKAGL NGEGYTLAIQ NEKLIDILGL 340
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 6 | 340 | 1 | 365 | 0.7718 |
0.8299 |
| AF-K0EXF1-F1-model_v4 | 5 | 339 | 1 | 375 | 0.7667 |
0.8348 |
| AF-Q9I1N0-F1-model_v4 | 6 | 340 | 1 | 367 | 0.7644 |
0.8255 |
| AF-Q58469-F1-model_v4 | 1 | 340 | 1 | 391 | 0.7621 |
0.8355 |
| AF-Q19265-F1-model_v4 | 5 | 340 | 1 | 398 | 0.7601 |
0.8474 |
| AF-P9WMZ3-F1-model_v4 | 5 | 340 | 1 | 380 | 0.7595 |
0.8343 |
| AF-X8F781-F1-model_v4 | 5 | 340 | 1 | 380 | 0.7591 |
0.8337 |
| AF-Q58577-F1-model_v4 | 6 | 340 | 3 | 348 | 0.7542 |
0.7994 |
| AF-Q0P9C9-F1-model_v4 | 6 | 340 | 1 | 371 | 0.7529 |
0.8221 |
| AF-A0A2K6WNG9-F1-model_v4 | 6 | 340 | 1 | 401 | 0.7527 |
0.8478 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A562Q4W0-F1-model_v4 | GT4 | 7 | 340 | 1 | 329 | 0.8211 |
0.8558 |
| A0A1I7LW09 | GT4 | 6 | 340 | 1 | 336 | 0.8105 |
0.842 |
| AF-A0A518AQ99-F1-model_v4 | GT4 | 2 | 340 | 1 | 338 | 0.8077 |
0.8558 |
| A0A8D5JZZ9 | GT4 | 5 | 340 | 1 | 336 | 0.8067 |
0.8433 |
| AF-A0A1X9YB06-F1-model_v4 | GT4 | 6 | 340 | 1 | 328 | 0.8043 |
0.8441 |
| A0A9J9LE73 | GT4 | 1 | 340 | 8 | 348 | 0.8032 |
0.8397 |
| AF-A0A250JGQ2-F1-model_v4 | GT4 | 1 | 340 | 9 | 352 | 0.8006 |
0.8476 |
| WDI30737.1 | GT4 | 1 | 340 | 1 | 338 | 0.7974 |
0.8254 |
| BDZ74634.1 | GT4 | 26 | 340 | 1 | 308 | 0.7972 |
0.8574 |
| A0A8G1EAF8 | GT0 | 3 | 340 | 1 | 327 | 0.7923 |
0.8517 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A562Q4W0 | GT4 | 7 | 340 | 1 | 329 | 0.8211 |
0.8558 |
| A0A1I7LW09 | GT4 | 6 | 340 | 1 | 336 | 0.8105 |
0.842 |
| WFS25211.1 | GT4 | 6 | 340 | 1 | 336 | 0.8092 |
0.84 |
| A0A518AQ99 | GT4 | 2 | 340 | 1 | 338 | 0.8077 |
0.8558 |
| A0A8D5JZZ9 | GT4 | 5 | 340 | 1 | 336 | 0.8067 |
0.8433 |
| A0A1X9YB06 | GT4 | 6 | 340 | 1 | 328 | 0.8043 |
0.8441 |
| A0A9J9LE73 | GT4 | 1 | 340 | 8 | 348 | 0.8032 |
0.8397 |
| A0A250JGQ2 | GT4 | 1 | 340 | 9 | 352 | 0.8006 |
0.8476 |
| A0A6I6LI45 | GT4 | 3 | 340 | 12 | 355 | 0.8001 |
0.8454 |
| WDI30737.1 | GT4 | 1 | 340 | 1 | 338 | 0.7974 |
0.8254 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oka-assembly1.cif.gz_A | 5 | 340 | 1 | 375 | 0.7622 |
0.831 |
| 3mbo-assembly4.cif.gz_G | 5 | 340 | 1 | 360 | 0.7531 |
0.8119 |
| 3mbo-assembly1.cif.gz_B | 5 | 340 | 1 | 364 | 0.7491 |
0.8115 |
| 4xsp-assembly1.cif.gz_A | 6 | 340 | 1 | 364 | 0.7476 |
0.8048 |
| 6tvp-assembly1.cif.gz_B | 3 | 340 | 1 | 388 | 0.7474 |
0.82 |
| 5d01-assembly1.cif.gz_B | 5 | 340 | 1 | 358 | 0.7462 |
0.7981 |
| 6tvp-assembly1.cif.gz_A | 3 | 340 | 1 | 385 | 0.7455 |
0.8155 |
| 5d00-assembly1.cif.gz_B | 1 | 340 | 1 | 359 | 0.7418 |
0.7869 |
| 2jjm-assembly1.cif.gz_B | 6 | 340 | 1 | 357 | 0.7418 |
0.7956 |
| 3mbo-assembly3.cif.gz_F | 5 | 340 | 1 | 364 | 0.7409 |
0.8032 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 6 | 340 | 1 | 365 | 0.7718 |
0.8299 |
| AF-Q8NNK8-F1-model_v4 | 1 | 340 | 1 | 378 | 0.7634 |
0.8267 |
| AF-Q58469-F1-model_v4 | 1 | 340 | 1 | 391 | 0.7621 |
0.8355 |
| AF-P9WMZ2-F1-model_v4 | 5 | 340 | 1 | 380 | 0.762 |
0.8365 |
| AF-P9WMZ3-F1-model_v4 | 5 | 340 | 1 | 380 | 0.7595 |
0.8343 |
| AF-Q58577-F1-model_v4 | 6 | 340 | 3 | 348 | 0.7542 |
0.7994 |
| AF-Q0P9C9-F1-model_v4 | 6 | 340 | 1 | 371 | 0.7529 |
0.8221 |
| AF-Q9H553-F1-model_v4 | 1 | 340 | 10 | 413 | 0.7501 |
0.8415 |
| AF-Q9DBE8-F1-model_v4 | 4 | 340 | 13 | 413 | 0.7469 |
0.8439 |
| AF-A0QRG8-F1-model_v4 | 6 | 340 | 1 | 371 | 0.7468 |
0.8151 |