PROTEIN: Rep_410_c_53_5
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Protein File & Metadata
Source:
Rep_410_c_53_5.pdb
Genome ID:
Protein ID:
Rep_410_c_53_5
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Detailed structural information will appear here after analysis...
Protein Sequence
MTSTTPYPLN SDDPTAGDNT TSFMLGYKLN GRENTVEDYG YDEQLRYYIY ANGQSQEACR 60 DQDHAMVGTG LFVDIAEIAW NQGDNLYGEL DNRILAGLEW AFRYNLSYIE NPADAWEPAG 120 YTRDENEAAK NPELFYQVRS RSGRWESVAP STKGRGDSFM GGGNRECALA HYAVRAGLDP 180 QRWEWTGKYR DFMIDNYGCE GYGKDTNHAY EWAGWGTLTK RRESGMAGDP GRWEDGVFIP 240 RLNTTDEEIN CADYDRHGDC ACGHTCSGNY ESAYRSDGRG MNITVSNGQP VVSGLNPGDW 300 MNYTVFIPAD GEYDITITHC GNETSECSIG NGRQTVTLPA SQNFVATKIG TFSLPAGVSV 360 IKLATPRPAT GLQLASMRVA PAQTTVLSTI MNESPSITVS GNTVTTSSLG GITAYDTLGR 420 TVASTTGHTL LLEPGLYILH SANSRPVKAI IR 452
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A515IMZ8-F1-model_v4 | CBM6 | 1 | 386 | 238 | 642 | 0.6625 |
0.9103 |
| A0A943VG22 | CBM6 | 1 | 452 | 247 | 800 | 0.6074 |
0.8182 |
| AF-A0A1B1Y3S5-F1-model_v4 | CBM47 , CBM6 | 1 | 452 | 253 | 891 | 0.6014 |
0.8027 |
| A0A9N7ELU1 | CBM6 | 1 | 447 | 231 | 706 | 0.5749 |
0.794 |
| AF-T2KK03-F1-model_v4 | CBM6 | 1 | 446 | 212 | 682 | 0.574 |
0.7879 |
| AF-A0A1B1Y3S8-F1-model_v4 | CBM6 | 1 | 436 | 220 | 839 | 0.5734 |
0.8054 |
| AF-I0BFH6-F1-model_v4 | CBM6 | 1 | 383 | 429 | 823 | 0.5704 |
0.8657 |
| AF-F8FPN0-F1-model_v4 | CBM6 | 1 | 383 | 454 | 848 | 0.5655 |
0.8672 |
| AF-H6NA51-F1-model_v4 | CBM6 | 1 | 383 | 454 | 848 | 0.5629 |
0.8632 |
| AF-A0A0P0EU33-F1-model_v4 | CBM6 , GH28 | 1 | 394 | 693 | 1097 | 0.5514 |
0.8926 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A943VG22 | CBM6 | 1 | 452 | 247 | 800 | 0.6074 |
0.8182 |
| A0A1B1Y3S5 | CBM47 , CBM6 | 1 | 452 | 253 | 891 | 0.6014 |
0.8027 |
| A0A9N7ELU1 | CBM6 | 1 | 447 | 231 | 706 | 0.5749 |
0.794 |
| F8FPN0 | CBM6 | 1 | 383 | 454 | 848 | 0.5655 |
0.8672 |
| A0A9N7ERX3 | CBM6 | 1 | 445 | 233 | 1038 | 0.5502 |
0.7814 |
| A0A173RXK3 | CBM6 , GH28 | 1 | 394 | 693 | 1097 | 0.5487 |
0.8879 |
| G8T7R5 | CBM6 | 1 | 452 | 250 | 1061 | 0.4761 |
0.7589 |
| B8GI51 | CBM6 | 5 | 452 | 214 | 734 | 0.3875 |
0.4887 |
| UKK53821.1 | CBM6 , GH10 | 1 | 452 | 156 | 881 | 0.3703 |
0.4929 |
| A0A402CVM6 | CBM6 | 3 | 447 | 294 | 865 | 0.3587 |
0.4808 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.