PROTEIN: Rep_408_c_79_11
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Protein File & Metadata
Source:
Rep_408_c_79_11.pdb
Genome ID:
Protein ID:
Rep_408_c_79_11
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Detailed structural information will appear here after analysis...
Protein Sequence
MKKIILTVLS LVMLSSVSPA AAADRWRIAD DGAINWEIKA NDPHSDHLEM SGQKISVVLR 60 YGVDASGAFS LNRSLVFPML RMKPNKTQNN LKQRFDVNIP ALVTIDDLNM TDEKVSNIKF 120 DGIMTVESSF SHVYRRKKVD NAVSLRRVLY PSINGAYYCE EYTFTNNMQN PITLRVPEWS 180 VRYTTPEEAG VYGSYIIEAS LSKNGLFTLK PGEKFEMNAI YSARKASEEP LRRVSTDAQR 240 DGRRALIRGW WDNLVLDTPD SVLNTMFSFA KLRGAESIYN TKGGLMHGPG GEAYYAAVWA 300 NDQAEYINPF FPYLGYEIGN QSALNSFRHF ARYMNDDYRP IPSSIISEGV GFWHGAKDRG 360 DGAMIAYGAA RYALARADME EARQLWPLIE WCLEYCRRKL NAAGVVASDS DELENRFPSG 420 DANLCTSSLY YDALLSASYL GKELGISSAK LNDYKKQASE LRKAIESHFG YEIEGYHSYR 480 YYDGNDILRA WICMPLTVGI NDRAKGTIEA LFSPRLWTDD GLLTQAGTET FWDRSTLYAL 540 RGTIAAGEVE KGLDFLQRYS RRRLLGDHVP YAIEAWPEGD QRHLSAESGL YCRIFTEGLF 600 GIRPTGFRSF DMTPRLPGAW DYANLNKVRA FGSDFDIRVS RAEGDKLDVR IMREGKCLIS 660 KKIKDGATLR IELPRK 676
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175W6Z5-F1-model_v4 | 23 | 676 | 5 | 779 | 0.7215 |
0.8129 |
| AF-U7PID1-F1-model_v4 | 23 | 676 | 6 | 806 | 0.7181 |
0.8203 |
| AF-Q9VKD9-F1-model_v4 | 28 | 675 | 20 | 739 | 0.7131 |
0.7893 |
| AF-Q54KX5-F1-model_v4 | 26 | 676 | 16 | 712 | 0.7086 |
0.7701 |
| AF-Q32M88-F1-model_v4 | 27 | 676 | 3 | 691 | 0.6995 |
0.7718 |
| AF-Q59005-F1-model_v4 | 43 | 611 | 1 | 615 | 0.6973 |
0.7973 |
| AF-A0A133CSL2-F1-model_v4 | 29 | 676 | 9 | 688 | 0.6961 |
0.7531 |
| AF-A0JMP0-F1-model_v4 | 54 | 676 | 1 | 648 | 0.6843 |
0.7452 |
| AF-P77154-F1-model_v4 | 29 | 669 | 2 | 745 | 0.6839 |
0.7711 |
| AF-Q10211-F1-model_v4 | 42 | 645 | 17 | 649 | 0.6758 |
0.7491 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2Z0H3-F1-model_v4 | CBM0 | 11 | 675 | 17 | 877 | 0.8349 |
0.9611 |
| WFB35204.1 | GH94 | 20 | 676 | 1 | 754 | 0.757 |
0.8296 |
| AF-D1CGZ9-F1-model_v4 | GH0 | 23 | 664 | 1 | 710 | 0.7508 |
0.8667 |
| AF-A0A089LI24-F1-model_v4 | GH94 | 22 | 676 | 1 | 758 | 0.746 |
0.8273 |
| AF-A0A7T5JTW5-F1-model_v4 | GH0 | 45 | 668 | 1 | 694 | 0.7459 |
0.8307 |
| WFB34355.1 | GH94 | 25 | 676 | 6 | 762 | 0.7418 |
0.8293 |
| AF-A0A089KG41-F1-model_v4 | GH94 | 21 | 676 | 3 | 757 | 0.7411 |
0.8222 |
| AF-Q0W318-F1-model_v4 | GH0 | 44 | 668 | 1 | 692 | 0.739 |
0.8189 |
| AF-F5L3Y8-F1-model_v4 | GH0 | 45 | 668 | 1 | 699 | 0.7389 |
0.8239 |
| AF-A0A1B1Z3C9-F1-model_v4 | GH0 | 45 | 667 | 1 | 701 | 0.7388 |
0.8263 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WFB35204.1 | GH94 | 20 | 676 | 1 | 754 | 0.757 |
0.8296 |
| A0A1Q2MCY1 | GH94 | 22 | 676 | 3 | 751 | 0.7479 |
0.8266 |
| A0A089LI24 | GH94 | 22 | 676 | 1 | 758 | 0.746 |
0.8273 |
| QYY36758.1 | GH94 | 20 | 676 | 1 | 746 | 0.7443 |
0.8179 |
| WFB34355.1 | GH94 | 25 | 676 | 6 | 762 | 0.7418 |
0.8293 |
| A0A089KG41 | GH94 | 21 | 676 | 3 | 757 | 0.7411 |
0.8222 |
| A0A482D4L9 | GH94 | 22 | 676 | 4 | 777 | 0.7411 |
0.831 |
| A3Z095 | GH176 | 40 | 664 | 1 | 706 | 0.7397 |
0.8272 |
| F9VLH0 | GH94 | 21 | 676 | 2 | 770 | 0.7383 |
0.8245 |
| WFB37418.1 | GH94 | 20 | 676 | 10 | 757 | 0.7373 |
0.815 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1v7v-assembly1.cif.gz_A | 22 | 676 | 1 | 768 | 0.735 |
0.8207 |
| 8bou-assembly1.cif.gz_A | 20 | 676 | 1 | 797 | 0.7252 |
0.82 |
| 8ho8-assembly1.cif.gz_B | 24 | 676 | 1 | 799 | 0.7231 |
0.8231 |
| 8ho9-assembly1.cif.gz_A | 23 | 676 | 1 | 800 | 0.7222 |
0.8219 |
| 3s4b-assembly1.cif.gz_A | 23 | 676 | 1 | 812 | 0.7218 |
0.8256 |
| 3qde-assembly1.cif.gz_B | 22 | 676 | 1 | 800 | 0.7216 |
0.8202 |
| 4zlf-assembly1.cif.gz_A | 25 | 676 | 1 | 774 | 0.7215 |
0.8122 |
| 3afj-assembly1.cif.gz_B | 23 | 676 | 1 | 812 | 0.7204 |
0.8242 |
| 3acs-assembly1.cif.gz_B | 23 | 676 | 1 | 812 | 0.7199 |
0.8237 |
| 3act-assembly1.cif.gz_A | 23 | 676 | 1 | 812 | 0.7197 |
0.8235 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q76IQ9-F1-model_v4 | 23 | 676 | 1 | 790 | 0.7291 |
0.8251 |
| AF-Q9F8X1-F1-model_v4 | 22 | 676 | 1 | 789 | 0.7285 |
0.8228 |
| AF-B9K7M6-F1-model_v4 | 23 | 676 | 1 | 802 | 0.7245 |
0.8251 |
| AF-Q7S0S2-F1-model_v4 | 23 | 676 | 6 | 780 | 0.7235 |
0.8146 |
| AF-Q8P3J4-F1-model_v4 | 21 | 676 | 9 | 786 | 0.7222 |
0.814 |
| AF-F1NZI4-F1-model_v4 | 27 | 676 | 15 | 699 | 0.711 |
0.7683 |
| AF-Q54KX5-F1-model_v4 | 26 | 676 | 16 | 712 | 0.7086 |
0.7701 |
| AF-Q32M88-F1-model_v4 | 27 | 676 | 3 | 691 | 0.6995 |
0.7718 |
| AF-Q59005-F1-model_v4 | 43 | 611 | 1 | 615 | 0.6973 |
0.7973 |
| AF-Q4J9D4-F1-model_v4 | 45 | 616 | 1 | 576 | 0.6969 |
0.7667 |