PROTEIN: Rep_408_c_115_3
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Protein File & Metadata
Source:
Rep_408_c_115_3.pdb
Genome ID:
Protein ID:
Rep_408_c_115_3
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Protein Sequence
MNIRTAILAL GLSAGLIASA QGLHKEINVD QKIEPIKRDA SRINVLPTLQ LPAVSRPQLA 60 FSDRVVTARV PNTIPTLAPM AYGDKLYESP YRGYVVMGLG APLFNATFSA GYRAIDTEKT 120 RLSLWSQYNG DIYRDKVTDH IGGAATEYTN YWRDHSASIG ADLRQSLGKT TALDAALDYT 180 YGYHTVPVGH MNYSQNISRV NASALLSSLT DGLSYTAGIH YGHFGFYHFD FPGAYSHYLE 240 NYPEKGARQN LFGAGGSVKL PVGETSDIAL DVNADFLRTG YHIIPLYAGN SEMAGGAAGT 300 SGLISLTPHF DFGSQDVKGS LGVQADITTG GGKTFHIAPE VTFAWTPSQI FGFEAKAKGG 360 SCLNSLTELY DVSPYLNSFM AYSQSHIPYA FDGRFTVGPF LGAYLEVFGG YAKANDWLMP 420 AGFNTYPGYG VYDTVDLSAW HAGAAIGYDY RDVFSARVSY ETAPNDYDKS YYEWRDRAKH 480 VVNANLSVRP IRPLLVTLDW EFRGGRRTYY LHSTESDGVL GSIVTPYSES LGCVSNLSLG 540 ASYTVTDRLT IFLNGQNLLN RRPDLIGFRP AQGTTAMIGA SLKF 584
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P06129-F1-model_v4 | 44 | 584 | 14 | 614 | 0.6826 |
0.7652 |
| AF-Q9I473-F1-model_v4 | 41 | 584 | 13 | 615 | 0.6818 |
0.761 |
| AF-A0A0H3GKA3-F1-model_v4 | 46 | 584 | 15 | 612 | 0.681 |
0.765 |
| AF-Q32H19-F1-model_v4 | 41 | 584 | 10 | 656 | 0.6591 |
0.7562 |
| AF-A0A0H3GRL7-F1-model_v4 | 10 | 584 | 1 | 748 | 0.6562 |
0.7568 |
| AF-Q9I5F7-F1-model_v4 | 43 | 584 | 31 | 687 | 0.6538 |
0.7685 |
| AF-Q32AX7-F1-model_v4 | 37 | 584 | 14 | 660 | 0.6531 |
0.7457 |
| AF-Q0P814-F1-model_v4 | 42 | 584 | 21 | 709 | 0.6523 |
0.7745 |
| AF-Q9HWM5-F1-model_v4 | 18 | 584 | 18 | 694 | 0.6505 |
0.7365 |
| AF-Q5F543-F1-model_v4 | 53 | 584 | 35 | 713 | 0.648 |
0.7854 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8blw-assembly1.cif.gz_A | 53 | 584 | 1 | 624 | 0.683 |
0.7831 |
| 2gsk-assembly1.cif.gz_A | 45 | 584 | 1 | 590 | 0.6777 |
0.747 |
| 1nqg-assembly1.cif.gz_A | 55 | 584 | 13 | 576 | 0.6727 |
0.7459 |
| 2guf-assembly1.cif.gz_A | 52 | 584 | 2 | 551 | 0.6716 |
0.7263 |
| 4rvw-assembly1.cif.gz_A | 55 | 584 | 9 | 610 | 0.6704 |
0.7634 |
| 3m8d-assembly1.cif.gz_A | 54 | 584 | 12 | 583 | 0.67 |
0.7462 |
| 1nqh-assembly1.cif.gz_A | 54 | 584 | 13 | 584 | 0.6691 |
0.7454 |
| 2ysu-assembly1.cif.gz_A | 52 | 584 | 1 | 576 | 0.6646 |
0.7333 |
| 4b7o-assembly1.cif.gz_A | 52 | 584 | 1 | 649 | 0.6633 |
0.7723 |
| 5fp2-assembly1.cif.gz_A | 53 | 584 | 1 | 498 | 0.6623 |
0.7271 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DD41-F1-model_v4 | 43 | 584 | 16 | 606 | 0.7044 |
0.7827 |
| AF-A7FD14-F1-model_v4 | 30 | 584 | 10 | 624 | 0.6889 |
0.76 |
| AF-Q6CZB5-F1-model_v4 | 45 | 584 | 14 | 615 | 0.6887 |
0.7739 |
| AF-A4WG45-F1-model_v4 | 44 | 584 | 12 | 615 | 0.6872 |
0.771 |
| AF-Q1CBU1-F1-model_v4 | 48 | 584 | 23 | 625 | 0.6855 |
0.779 |
| AF-Q7MQ42-F1-model_v4 | 45 | 584 | 19 | 613 | 0.6847 |
0.7678 |
| AF-Q93SE0-F1-model_v4 | 33 | 584 | 5 | 614 | 0.6843 |
0.7535 |
| AF-O52903-F1-model_v4 | 36 | 584 | 5 | 612 | 0.6842 |
0.755 |
| AF-Q32AE6-F1-model_v4 | 33 | 584 | 5 | 614 | 0.6832 |
0.7515 |
| AF-Q8Z314-F1-model_v4 | 35 | 584 | 5 | 614 | 0.6832 |
0.7542 |