PROTEIN: Rep_406_c_173_10
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Protein File & Metadata
Source:
Rep_406_c_173_10.pdb
Genome ID:
Protein ID:
Rep_406_c_173_10
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Detailed structural information will appear here after analysis...
Protein Sequence
MSLNHFKNLI AVALPVIIAG CNASNTPIDR QALVERNNPH ITTIDTLASL TVGNGGFAYT 60 VDVTGLQTFP ETYSKGVPLG TQSEWGWHSY PNPDSLRHEE TLKDYDFGRG RMEPYAVQFN 120 EEGRNKDAAN WYRINPHRLH LGSIGFAGMT ADSITDIDQT LDMWNGEIRS NFKYNGTPVS 180 VQTVCHPDRD MIAATINNPA RTPVTVRFPY PTGGHSDDAC DWSKDDLHST EIVESDANHA 240 LLRHTIDSTS YYVNLAWDNA ATPVLTGKNT VTLTPTADKW EFTAAFSPEK PGDANPDAEA 300 TRLASANYWK DFWGTGGVVD FSHCTDPRAA ELERRVVLSQ YLLATNCAGT TPPQETGLTY 360 NSWFGKFHME MIWWHQAQFA LYGHEKLLAR TLPWYGTVAD VAKGIAERQG FKGLRWMKMT 420 DPSGMEAPSK VGSFLIWQQP HLIYLAELLY RANPEEQQKV LDEYYDLVQQ TAEFMGSFAD 480 YDAENDRYIL RGIIPAQETL RAAETVNPPF ELSYWHYALS TAQKWRERKG EPRNEEWDTI 540 ISKLSPLAAK DNLYLAAETA PQTYEDIRFT SDHMAVLAAV GVLPQCDLVK PEVMDSTFDW 600 IYDNWNWDKT WGWDYPTTAM CAVRLGHPEK AINALLMNKR TNTYLPNGHN YQDNRLRCYL 660 PGNGGLLTTV ALMCAGWDGC NEKNPGFPKN GTWDVRWEGI KPLP 704
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1D2X6-F1-model_v4 | 11 | 704 | 11 | 702 | 0.9265 |
0.947 |
| AF-A0A175VVL5-F1-model_v4 | 21 | 704 | 12 | 701 | 0.9238 |
0.9534 |
| AF-U7PKL5-F1-model_v4 | 24 | 704 | 22 | 733 | 0.8925 |
0.9456 |
| AF-Q8DNW5-F1-model_v4 | 25 | 704 | 1 | 734 | 0.7581 |
0.8443 |
| AF-Q8DN23-F1-model_v4 | 35 | 704 | 1 | 709 | 0.7569 |
0.8356 |
| AF-A0A0D2EYV5-F1-model_v4 | 32 | 704 | 3 | 713 | 0.7504 |
0.8292 |
| AF-U7PSZ4-F1-model_v4 | 32 | 704 | 23 | 719 | 0.7501 |
0.8374 |
| AF-K0ERA7-F1-model_v4 | 34 | 704 | 10 | 743 | 0.7499 |
0.8346 |
| AF-P9WN13-F1-model_v4 | 34 | 704 | 9 | 742 | 0.7468 |
0.8334 |
| AF-A0A132ZDE7-F1-model_v4 | 35 | 704 | 1 | 708 | 0.7453 |
0.8046 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G1IS17-F1-model_v4 | GH95 | 24 | 703 | 1 | 733 | 0.7849 |
0.8394 |
| BCW30860.1 | GH43_17 | 22 | 704 | 302 | 1038 | 0.7802 |
0.9602 |
| A0A9X1BCL7 | GH95 | 33 | 704 | 1 | 690 | 0.7718 |
0.8359 |
| AF-B6H4K4-F1-model_v4 | GH95 | 33 | 704 | 1 | 693 | 0.7716 |
0.8376 |
| AF-A0A4P8KEA5-F1-model_v4 | GH65 | 35 | 703 | 1 | 695 | 0.7712 |
0.8256 |
| AF-A0A384JP66-F1-model_v4 | GH95 | 32 | 704 | 3 | 701 | 0.771 |
0.8391 |
| AF-A0A7T6XTB1-F1-model_v4 | GH95 | 33 | 704 | 1 | 693 | 0.7708 |
0.8368 |
| AF-A0A7M2RJK4-F1-model_v4 | GH95 | 29 | 704 | 1 | 703 | 0.7695 |
0.8353 |
| AF-Q47PH0-F1-model_v4 | GH95 | 33 | 704 | 4 | 697 | 0.7694 |
0.8417 |
| AF-E4Q4M2-F1-model_v4 | GH95 | 29 | 704 | 1 | 698 | 0.7684 |
0.8353 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A917DS75 | GH65 | 26 | 703 | 1 | 666 | 0.7992 |
0.832 |
| F0R347 | GH65 | 24 | 703 | 15 | 670 | 0.7909 |
0.8416 |
| QZT38678.1 | GH65 | 29 | 700 | 24 | 672 | 0.7893 |
0.8446 |
| UOH78939.1 | GH65 | 31 | 702 | 14 | 667 | 0.7889 |
0.839 |
| A0A3S9P3R6 | GH65 | 32 | 703 | 21 | 674 | 0.7825 |
0.8362 |
| A0A412CKD5 | GH65 | 33 | 702 | 23 | 680 | 0.7821 |
0.8333 |
| UKB83162.1 | GH65 | 34 | 702 | 25 | 664 | 0.7817 |
0.8463 |
| BCW30860.1 | GH43_17 | 22 | 704 | 302 | 1038 | 0.7802 |
0.9602 |
| E0S367 | GH95 | 36 | 704 | 1 | 695 | 0.7798 |
0.8357 |
| WGK64939.1 | GH65 | 32 | 702 | 32 | 685 | 0.779 |
0.8371 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7fe3-assembly1.cif.gz_A | 34 | 703 | 2 | 653 | 0.7913 |
0.8354 |
| 7kmq-assembly1.cif.gz_B | 27 | 704 | 1 | 698 | 0.7609 |
0.8265 |
| 7kmq-assembly1.cif.gz_A | 28 | 704 | 1 | 696 | 0.7605 |
0.8266 |
| 3wiq-assembly1.cif.gz_A-2 | 31 | 704 | 2 | 748 | 0.7501 |
0.8166 |
| 1h54-assembly1.cif.gz_A | 34 | 703 | 7 | 740 | 0.7414 |
0.8141 |
| 6w0p-assembly1.cif.gz_A | 34 | 704 | 11 | 736 | 0.7363 |
0.8072 |
| 2rdy-assembly1.cif.gz_B | 37 | 704 | 1 | 720 | 0.7347 |
0.824 |
| 4ufc-assembly1.cif.gz_A | 36 | 704 | 1 | 745 | 0.7346 |
0.8231 |
| 7zo0-assembly1.cif.gz_A | 32 | 704 | 1 | 718 | 0.7329 |
0.8043 |
| 4ktp-assembly1.cif.gz_B | 33 | 704 | 10 | 744 | 0.732 |
0.8047 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8GRC3-F1-model_v4 | 33 | 704 | 1 | 741 | 0.7544 |
0.8309 |
| AF-Q9CID5-F1-model_v4 | 32 | 704 | 1 | 750 | 0.7533 |
0.8302 |
| AF-Q8L164-F1-model_v4 | 34 | 704 | 12 | 760 | 0.7531 |
0.8353 |
| AF-A2R797-F1-model_v4 | 24 | 704 | 14 | 748 | 0.7517 |
0.8316 |
| AF-A9KM56-F1-model_v4 | 33 | 704 | 4 | 740 | 0.7505 |
0.8221 |
| AF-Q5AU81-F1-model_v4 | 24 | 704 | 13 | 767 | 0.7492 |
0.836 |
| AF-P9WN13-F1-model_v4 | 34 | 704 | 9 | 742 | 0.7468 |
0.8334 |
| AF-P9WN12-F1-model_v4 | 34 | 704 | 9 | 742 | 0.7462 |
0.8329 |
| AF-Q49736-F1-model_v4 | 34 | 704 | 9 | 742 | 0.7441 |
0.8333 |
| AF-A9KT32-F1-model_v4 | 33 | 703 | 1 | 739 | 0.7424 |
0.8127 |