PROTEIN: Rep_40_c_9_54
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Protein File & Metadata
Source:
Rep_40_c_9_54.pdb
Genome ID:
Protein ID:
Rep_40_c_9_54
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Protein Sequence
MPRQCEISAL ILDREPRANN ALMLSALSRE RGLVFLFKKM SAKKTSIAPD LFEEIYALAQ 60 MPTMAEETAP VFFISEFDSV KSRRDISTSY EKLKTASQIA GIVKSNGTDM GETAAMFDFV 120 SKALDSIASS RNLDAVRLKF IYLLAKAQGY PVREDFFRRL SPSDRNGFCL MLKTPSAELG 180 GQLEEARRLL DMLTRWTLEN TDIVL 205
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EWE2-F1-model_v4 | 2 | 205 | 1 | 234 | 0.7483 |
0.8474 |
| AF-P9WHI5-F1-model_v4 | 2 | 205 | 1 | 234 | 0.7252 |
0.8414 |
| AF-Q9CCN0-F1-model_v4 | 2 | 205 | 1 | 234 | 0.7245 |
0.8438 |
| AF-A0A132Z1J9-F1-model_v4 | 1 | 205 | 1 | 237 | 0.7191 |
0.8387 |
| AF-Q8DRN4-F1-model_v4 | 2 | 205 | 2 | 235 | 0.7116 |
0.8181 |
| AF-P44642-F1-model_v4 | 3 | 205 | 1 | 222 | 0.7046 |
0.785 |
| AF-P0A285-F1-model_v4 | 3 | 205 | 1 | 222 | 0.703 |
0.7912 |
| AF-Q2FY07-F1-model_v4 | 5 | 205 | 1 | 234 | 0.7014 |
0.8068 |
| AF-Q32CV6-F1-model_v4 | 3 | 205 | 1 | 222 | 0.699 |
0.7869 |
| AF-Q9XCX7-F1-model_v4 | 2 | 205 | 1 | 218 | 0.6984 |
0.7723 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2v1c-assembly1.cif.gz_C-2 | 2 | 205 | 1 | 225 | 0.7361 |
0.8071 |
| 1w3s-assembly1.cif.gz_A | 2 | 205 | 2 | 225 | 0.7296 |
0.8006 |
| 1u5k-assembly1.cif.gz_B | 2 | 205 | 3 | 227 | 0.7259 |
0.8008 |
| 1u5k-assembly1.cif.gz_A | 2 | 205 | 2 | 230 | 0.7202 |
0.8095 |
| 4jcv-assembly1.cif.gz_E | 2 | 203 | 1 | 214 | 0.717 |
0.771 |
| 4jcv-assembly1.cif.gz_F | 4 | 204 | 1 | 213 | 0.7165 |
0.7724 |
| 8bpr-assembly1.cif.gz_G | 6 | 205 | 1 | 186 | 0.7121 |
0.7866 |
| 3q8d-assembly1.cif.gz_A | 4 | 205 | 1 | 221 | 0.6986 |
0.7768 |
| 7ymo-assembly1.cif.gz_A | 5 | 205 | 1 | 206 | 0.6762 |
0.7253 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B0K710-F1-model_v4 | 2 | 205 | 1 | 236 | 0.775 |
0.8716 |
| AF-B0KA52-F1-model_v4 | 2 | 205 | 1 | 236 | 0.7708 |
0.868 |
| AF-Q8RB48-F1-model_v4 | 2 | 205 | 1 | 236 | 0.7675 |
0.8638 |
| AF-C5C4P4-F1-model_v4 | 2 | 205 | 1 | 234 | 0.7664 |
0.8562 |
| AF-Q3AEY5-F1-model_v4 | 2 | 205 | 1 | 237 | 0.7661 |
0.8527 |
| AF-Q9L2H3-F1-model_v4 | 2 | 205 | 1 | 240 | 0.7651 |
0.8636 |
| AF-B1VY58-F1-model_v4 | 2 | 205 | 1 | 240 | 0.765 |
0.8635 |
| AF-A9B168-F1-model_v4 | 1 | 205 | 2 | 242 | 0.7636 |
0.8638 |
| AF-Q82BS6-F1-model_v4 | 2 | 205 | 1 | 240 | 0.7635 |
0.862 |
| AF-Q47RM7-F1-model_v4 | 2 | 205 | 1 | 234 | 0.7605 |
0.8509 |