PROTEIN: Rep_396_c_20_48
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Protein File & Metadata
Source:
Rep_396_c_20_48.pdb
Genome ID:
Protein ID:
Rep_396_c_20_48
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Protein Sequence
MRSCDREPVI SVGLLTAPKI ESRILPDGTF EIENVKIGIG FHWERRERQR FAGKLRVIRD 60 GLMEVAVNDI PLEEYLKSQR YQGLARQTNP TAARAVGETR GEVLTFDGAI CDTRFSKCCG 120 GRSELFENCW EPVAHPYLTS VADNAGPGAR DFCDTDDAEI LRQVLNSYDR ETPDFYRWEV 180 SYAPGELSAL LRRRTGVDFG DIKALEPLER GLSGRIIRLR VSGSRRAMVI GKELEIRRAL 240 SESHLYSSAF DASAENGRWV LRGRGWGHGV GMCQIGAAVM GAKGYDYRQI LAHYFPNASL 300 TKIYE 305
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N3FW23 | GT2 | 1 | 305 | 824 | 1295 | 0.5756 |
0.9378 |
| AF-A0A2K9H6Y3-F1-model_v4 | GT2 | 1 | 305 | 392 | 1250 | 0.5735 |
0.9279 |
| AF-A0A7D4G7S7-F1-model_v4 | GT2 | 1 | 305 | 391 | 1249 | 0.5732 |
0.9274 |
| AF-A0A250KHW7-F1-model_v4 | GT2 | 1 | 305 | 391 | 1249 | 0.5729 |
0.9269 |
| AF-A0A0K1NIT7-F1-model_v4 | GT2 | 1 | 305 | 391 | 1249 | 0.5722 |
0.9256 |
| AF-T1THQ9-F1-model_v4 | GT2 | 1 | 305 | 581 | 1261 | 0.5719 |
0.9275 |
| C9MMY7 | GT2 | 1 | 305 | 797 | 1244 | 0.5712 |
0.9235 |
| AF-A0A5P8E416-F1-model_v4 | GT2 | 5 | 305 | 828 | 1262 | 0.571 |
0.9373 |
| AF-A0A7H1MP78-F1-model_v4 | GT2 | 1 | 305 | 691 | 1260 | 0.5615 |
0.9113 |
| AF-D5ETB0-F1-model_v4 | GT2 | 1 | 305 | 578 | 1224 | 0.5614 |
0.9052 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N3FW23 | GT2 | 1 | 305 | 824 | 1295 | 0.5756 |
0.9378 |
| C9MMY7 | GT2 | 1 | 305 | 797 | 1244 | 0.5712 |
0.9235 |
| UKK47266.1 | GT2 | 5 | 305 | 859 | 1267 | 0.561 |
0.9216 |
| A0A2N6QR17 | GT2 | 3 | 305 | 821 | 1264 | 0.56 |
0.9146 |
| A0A6M6E844 | CBM50 | 3 | 305 | 31 | 462 | 0.5168 |
0.7733 |
| A0A975LGA7 | CBM50 | 1 | 304 | 249 | 568 | 0.4903 |
0.6456 |
| A0A975LLJ1 | CBM50 | 3 | 303 | 77 | 563 | 0.4822 |
0.6392 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5txu-assembly1.cif.gz_A | 5 | 305 | 3 | 285 | 0.6675 |
0.708 |
| 4rwr-assembly2.cif.gz_B | 1 | 305 | 1 | 268 | 0.6036 |
0.6587 |
| 4rwr-assembly1.cif.gz_A | 1 | 305 | 1 | 266 | 0.6004 |
0.6593 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0QYX7-F1-model_v4 | 1 | 305 | 1 | 356 | 0.6488 |
0.7267 |
| AF-P07372-F1-model_v4 | 5 | 305 | 58 | 334 | 0.5798 |
0.6854 |
| AF-P13251-F1-model_v4 | 5 | 305 | 59 | 335 | 0.5779 |
0.684 |
| AF-Q02113-F1-model_v4 | 3 | 303 | 22 | 705 | 0.5443 |
0.7748 |