PROTEIN: Rep_3481_c_20_10
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Protein File & Metadata
Source:
Rep_3481_c_20_10.pdb
Genome ID:
Protein ID:
Rep_3481_c_20_10
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Protein Sequence
MYGGNGFKRR IAPEQTAVLD RMTTEVRSPE RKAVSFKMQD SLVMTPFSEE CDLFLFMEDE 60 YSFFKTGKKS FTELRLEAQE AALKKCEVYP RVTLEMIYGI FAKLSGISPE GRERLMQREC 120 ELISYFSFPR ECGKALFREA KANKKRTVII SESVYPRDVV ENILENCGYG SYDELIIVSE 180 IKNCTAESWY NAALSASGTE AGKLLHIGSS VAFDIELPIV KGSKALLLAP VMQLMEKSGR 240 ILGYIRKKHL YDYDSTKYLT LHCALGLYAA YGFDYPQNKK ALSDFCGDGC MLGFLAAGAA 300 GLDTESYGKG GKMRPLIIQA LKSDERFLDG LDDFRTMLDG LFGGNLEKYG AESCGEFLDF 360 LEECCASGDR ELFRPYLSTD ALKKWSSSVK EPEIIPFSGK KRKKSVLYRL ADKMFPPGTR 420 VRNITDGILA KLHKKH 436
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8I2-F1-model_v4 | 1 | 436 | 1 | 945 | 0.5076 |
0.7166 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAJ24550.1 | GT2 | 1 | 436 | 102 | 1016 | 0.6019 |
0.8472 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 432 | 101 | 1014 | 0.587 |
0.8363 |
| U5MZQ8 | GT2 | 1 | 432 | 101 | 1014 | 0.587 |
0.8363 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 390 | 101 | 962 | 0.5647 |
0.8847 |
| WII09730.1 | GT111 | 11 | 388 | 381 | 943 | 0.5275 |
0.8291 |
| A0A7U7W2D8 | GT4 | 1 | 411 | 1 | 974 | 0.5086 |
0.7565 |
| AF-Q0P8I2-F1-model_v4 | GT4 | 1 | 436 | 1 | 945 | 0.5079 |
0.717 |
| UKD35065.1 | GT111 | 12 | 389 | 262 | 827 | 0.5015 |
0.7842 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 17 | 390 | 429 | 1015 | 0.4941 |
0.8 |
| A0A0U3BMS4 | GT111 | 9 | 389 | 134 | 860 | 0.485 |
0.7577 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAJ24550.1 | GT2 | 1 | 436 | 102 | 1016 | 0.6019 |
0.8472 |
| U5MZQ8 | GT2 | 1 | 432 | 101 | 1014 | 0.587 |
0.8363 |
| WII09730.1 | GT111 | 11 | 388 | 381 | 943 | 0.5275 |
0.8291 |
| A0A7U7W2D8 | GT4 | 1 | 411 | 1 | 974 | 0.5086 |
0.7565 |
| UKD35065.1 | GT111 | 12 | 389 | 262 | 827 | 0.5015 |
0.7842 |
| A0A078BDS9 | GT2 | 17 | 390 | 429 | 1015 | 0.4941 |
0.8 |
| A0A0U3BMS4 | GT111 | 9 | 389 | 134 | 860 | 0.485 |
0.7577 |
| A6M2M4 | GT2 | 17 | 436 | 1 | 1350 | 0.4844 |
0.7624 |
| A0A974WXG9 | GT4 | 28 | 392 | 430 | 1058 | 0.4837 |
0.8189 |
| A0A975E9I4 | GT2 | 15 | 390 | 416 | 1004 | 0.4806 |
0.7698 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly2.cif.gz_D | 29 | 397 | 270 | 893 | 0.4845 |
0.779 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.