PROTEIN: Rep_3477_c_0_2827
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Protein File & Metadata
Source:
Rep_3477_c_0_2827.pdb
Genome ID:
Protein ID:
Rep_3477_c_0_2827
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Protein Sequence
MSDFFKNIGK IPYEGKDSTN PLAFKYYNPD EVVNGKPMRE QLKFALSWWH TMGGDGTDMF 60 GCGTTDKTWG ETDPEKRAIA KADAAFEIMD KLSIDYYCFH DRDLSPEFGS LAETNAELDK 120 VVAYLEKKQA ETGKKLLWGT AKCFDHPRYM HGAGTSPSAD VFAYAAAQIK KAVEATVKLG 180 GKGYVFWGGR EGYETLLNTN MALEQDNMAR LMRMTVDYAR SIGYTGDFYI EPKPKEPTKH 240 QYDFDTATVL GFLRKYGLDK DFKMNIEANH ATLAQHTFQH ELRVARDNGV FGSIDANQGD 300 PLLGWDTDQF PTNVYDAALC MYEVIKAGGF TNGGLNFDAK ARRGSYTRED IFHSYIAGMD 360 TFALGYKIAL KLIEDGRIDK FVEDRYASWK TGIGADIISG KATMADLEKY ALEKGEVVDS 420 LCSGRQEMLE SIMNNIMFSV 440
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44398-F1-model_v4 | 1 | 439 | 1 | 439 | 0.9768 |
0.9834 |
| AF-P00944-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9742 |
0.9802 |
| AF-A0A0H3GR15-F1-model_v4 | 1 | 439 | 1 | 439 | 0.9741 |
0.9811 |
| AF-A0A0H3H006-F1-model_v4 | 1 | 440 | 1 | 440 | 0.974 |
0.9801 |
| AF-Q8ZL90-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9735 |
0.9796 |
| AF-Q9FKK7-F1-model_v4 | 1 | 437 | 42 | 477 | 0.9344 |
0.9855 |
| AF-I1MSU1-F1-model_v4 | 1 | 437 | 45 | 480 | 0.9302 |
0.9842 |
| AF-Q8H3Q7-F1-model_v4 | 1 | 437 | 44 | 479 | 0.929 |
0.9822 |
| AF-A0A1D6F3V1-F1-model_v4 | 1 | 437 | 47 | 493 | 0.9188 |
0.9821 |
| AF-A0A1D6ING2-F1-model_v4 | 1 | 437 | 49 | 494 | 0.9145 |
0.9788 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-C6XT41-F1-model_v4 | GH20 | 33 | 436 | 616 | 905 | 0.4211 |
0.8362 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1a0d-assembly1.cif.gz_A | 3 | 440 | 1 | 436 | 0.9776 |
0.9882 |
| 1a0c-assembly1.cif.gz_A | 2 | 439 | 1 | 437 | 0.9773 |
0.9858 |
| 1a0e-assembly1.cif.gz_A | 2 | 440 | 1 | 439 | 0.9735 |
0.984 |
| 6t8f-assembly1.cif.gz_D | 1 | 437 | 1 | 436 | 0.9731 |
0.9832 |
| 4xkm-assembly2.cif.gz_E | 2 | 437 | 1 | 435 | 0.9726 |
0.9836 |
| 5nh4-assembly1.cif.gz_C | 1 | 437 | 1 | 436 | 0.9724 |
0.9826 |
| 6int-assembly1.cif.gz_B | 5 | 440 | 1 | 412 | 0.9463 |
0.9828 |
| 1bxb-assembly1.cif.gz_D | 15 | 440 | 1 | 387 | 0.8496 |
0.916 |
| 1bxc-assembly1.cif.gz_A | 15 | 440 | 1 | 387 | 0.8495 |
0.916 |
| 1xyb-assembly1.cif.gz_A | 15 | 440 | 1 | 386 | 0.8469 |
0.9137 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9S306-F1-model_v4 | 2 | 440 | 1 | 438 | 0.9934 |
0.9986 |
| AF-B9MPG8-F1-model_v4 | 2 | 440 | 1 | 438 | 0.9849 |
0.9912 |
| AF-P19148-F1-model_v4 | 1 | 440 | 1 | 439 | 0.9848 |
0.9902 |
| AF-Q9KGU2-F1-model_v4 | 2 | 440 | 1 | 438 | 0.9843 |
0.9907 |
| AF-B0K1L3-F1-model_v4 | 2 | 440 | 1 | 438 | 0.9837 |
0.9902 |
| AF-P22842-F1-model_v4 | 2 | 440 | 1 | 438 | 0.9836 |
0.9901 |
| AF-P30435-F1-model_v4 | 1 | 440 | 1 | 439 | 0.9828 |
0.9884 |
| AF-P29441-F1-model_v4 | 1 | 440 | 1 | 439 | 0.9826 |
0.9883 |
| AF-Q7UVG2-F1-model_v4 | 2 | 440 | 1 | 439 | 0.9822 |
0.988 |
| AF-A0AF79-F1-model_v4 | 2 | 440 | 1 | 435 | 0.9806 |
0.9908 |