PROTEIN: Rep_3462_c_62_105
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Protein File & Metadata
Source:
Rep_3462_c_62_105.pdb
Genome ID:
Protein ID:
Rep_3462_c_62_105
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Protein Sequence
MIKTKKINFT YVLFVIFLYF FLLKDYLERL FPILSYSDEL LAALAIPVFV IRTKTRLDKK 60 QHLGYGLFIA IFLISGFIGS IAYRYQPFVK VVFPDMFLCM KFWFAIYVGR YAFKDMPFRR 120 YAPKMFKHIK FITWSYLVLI ALNYLRILEF PFAKERYGLP AIKLFYYHPT VMVFNSVLLL 180 AILISIKSYV HGTNKYFFLI SLIACTSLRS KAFAAVAIFV FIYYIVFVYR KKLKFVNLIL 240 FLPIAFVIAW NQVYYYFFSD IKDGSARFLL LKKAVQVATD HFPTGAGFGT YGSYLSGKYY 300 SPLYYRYGLN QAWGLSEDRW GFVSDSFWPM ILGQAGWIGL IFYLIAIIKL FQEIQRIEKR 360 SLALYSSGLV ILLYMLIDST GSSSFVHSLA IPLAFWLGVV LNEAKVRQQR HDDRVAAEEA 420 ERLAIEKENQ LIKQAEKIED VDEKLSQVSL EQLGEIRFKK KIVIRKPTEF NKENDFKLEK 480 PKEESEE 487
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 6 | 476 | 8 | 429 | 0.6282 |
0.6964 |
| AF-Q9HUG6-F1-model_v4 | 6 | 459 | 16 | 401 | 0.6228 |
0.7243 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 6 | 412 | 4 | 407 | 0.6175 |
0.6971 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 3 | 473 | 1 | 510 | 0.5688 |
0.6885 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 3 | 473 | 1 | 510 | 0.5683 |
0.688 |
| AF-M1FGR5-F1-model_v4 | GT2 | 6 | 473 | 2 | 515 | 0.5616 |
0.6858 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 6 | 473 | 1 | 513 | 0.5591 |
0.6799 |
| AF-E4PMS8-F1-model_v4 | GT2 | 3 | 473 | 1 | 513 | 0.5586 |
0.6753 |
| AF-A0A346S464-F1-model_v4 | GT2 | 3 | 473 | 1 | 515 | 0.5561 |
0.6742 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 8 | 472 | 1 | 508 | 0.556 |
0.6779 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 4 | 473 | 4 | 516 | 0.5559 |
0.6752 |
| QSP96058.1 | GT2 | 4 | 473 | 5 | 520 | 0.5543 |
0.6741 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 6 | 412 | 4 | 407 | 0.6175 |
0.6971 |
| QSP96058.1 | GT2 | 4 | 473 | 5 | 520 | 0.5543 |
0.6741 |
| D5MJ04 | GT9 | 6 | 462 | 23 | 708 | 0.5352 |
0.7007 |
| A0A9Q9IL13 | GT4 | 1 | 466 | 1 | 892 | 0.5327 |
0.7323 |
| B5YD26 | GT9 | 6 | 487 | 40 | 569 | 0.531 |
0.6663 |
| WBY01952.1 | GT9 | 3 | 455 | 10 | 710 | 0.5276 |
0.694 |
| A0A0C5WHY3 | GT4 | 5 | 468 | 3 | 754 | 0.5244 |
0.6728 |
| A0A517MXC4 | GT26 | 6 | 439 | 18 | 474 | 0.5188 |
0.7022 |
| K0J022 | GT4 | 3 | 469 | 1 | 760 | 0.5155 |
0.6587 |
| A0A2P1NHY6 | GT4 | 2 | 463 | 21 | 450 | 0.4886 |
0.6924 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 6 | 459 | 16 | 401 | 0.6228 |
0.7243 |