PROTEIN: Rep_3459_c_0_19
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Protein File & Metadata
Source:
Rep_3459_c_0_19.pdb
Genome ID:
Protein ID:
Rep_3459_c_0_19
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Protein Sequence
MFLRTVKRKC YQVKIKKYKK ILGDCPGLLA AADNTAMESK GKLAQVTAYV TAPVLFCYVG 60 YVIENAVKQG IQRIYFLARD GYILKSIADV IIKKRALGID TRYLYVSRYA LRNALYFKCD 120 TVQDFENAGF FGHCAVQSAE NTLKRAGLEE RQRVEVYRKI GFTDDEKKIL NDAEYNDFCT 180 LVKNDKELFS DIKNRSEKNY KNIIEYFRRN GLFDDKKIAL VDSGWLGSVQ KTLTELIRDK 240 TDTDRITGYY FGLYREKNDK YNSFLFDISD AHKYVPTFCN NLFECFCSAP HGMTTGYTVT 300 DNGVQPITAE ANSFIIEAAS VQTEIAVNFA GYACESTADI SVKELKKLSA RLLKALMYKP 360 DREEAEIFGA FPFCDDATEI SVQPIACDSG KSISNILFLK RISRKRKGQS IYPDKGMFWL 420 YGSIILSGCK PVWIYRLSVR SWEKLRLVKE KRKLCR 456
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 16 | 436 | 206 | 631 | 0.6383 |
0.8065 |
| AF-Q0P8I2-F1-model_v4 | 2 | 445 | 352 | 975 | 0.4739 |
0.6761 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 20 | 455 | 649 | 1091 | 0.583 |
0.8607 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 19 | 451 | 617 | 1067 | 0.581 |
0.8575 |
| A0A974WXG9 | GT4 | 5 | 442 | 543 | 1078 | 0.579 |
0.8529 |
| A0A1I7GMF6 | GT2 | 20 | 448 | 646 | 1083 | 0.5773 |
0.8635 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 9 | 442 | 5 | 403 | 0.5548 |
0.753 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 6 | 445 | 4 | 405 | 0.5388 |
0.7824 |
| QRK05458.1 | GT4 | 21 | 455 | 249 | 988 | 0.5358 |
0.8106 |
| A0A9J7AXY3 | GT2 | 11 | 448 | 4 | 399 | 0.5354 |
0.7657 |
| V4JBH5 | GT2 | 10 | 445 | 1 | 398 | 0.5334 |
0.7703 |
| A6M2M4 | GT2 | 2 | 456 | 3 | 917 | 0.5303 |
0.7986 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 19 | 451 | 617 | 1067 | 0.581 |
0.8575 |
| A0A974WXG9 | GT4 | 5 | 442 | 543 | 1078 | 0.579 |
0.8529 |
| A0A1I7GMF6 | GT2 | 20 | 448 | 646 | 1083 | 0.5773 |
0.8635 |
| A0A0U5F758 | GT2 | 9 | 442 | 5 | 403 | 0.5548 |
0.753 |
| A0A0H3KC95 | GT2 | 6 | 445 | 4 | 405 | 0.5388 |
0.7824 |
| QRK05458.1 | GT4 | 21 | 455 | 249 | 988 | 0.5358 |
0.8106 |
| A0A9J7AXY3 | GT2 | 11 | 448 | 4 | 399 | 0.5354 |
0.7657 |
| V4JBH5 | GT2 | 10 | 445 | 1 | 398 | 0.5334 |
0.7703 |
| A6M2M4 | GT2 | 2 | 456 | 3 | 917 | 0.5303 |
0.7986 |
| M4S1R1 | GT4 | 21 | 445 | 219 | 724 | 0.5243 |
0.7817 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 23 | 371 | 241 | 591 | 0.5657 |
0.8273 |
| 8a0m-assembly1.cif.gz_B | 14 | 441 | 459 | 876 | 0.5413 |
0.7989 |
| 8a0c-assembly1.cif.gz_A | 14 | 441 | 597 | 1028 | 0.5345 |
0.8072 |
| 8a0m-assembly2.cif.gz_C | 14 | 441 | 593 | 1024 | 0.5322 |
0.8027 |
| 8a0m-assembly1.cif.gz_A | 14 | 441 | 592 | 1023 | 0.5314 |
0.8013 |
| 8a0c-assembly1.cif.gz_B | 14 | 438 | 597 | 1026 | 0.5296 |
0.8048 |
| 8a0m-assembly2.cif.gz_D | 14 | 441 | 488 | 887 | 0.5125 |
0.7902 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.