PROTEIN: Rep_3396_c_54_3
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Protein File & Metadata
Source:
Rep_3396_c_54_3.pdb
Genome ID:
Protein ID:
Rep_3396_c_54_3
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Protein Sequence
MLNVLLLMAL VGVMTAMWPI NKFATKNGAR PETLGMMTCV SGLVLSILYQ ASSGNSWGNW 60 KIWGLGLLGG FAYAMGFFVL ITGCLKIGPV GLTTAMNNMG MVGPLILGLL FFGEVKSFSL 120 LKGLRFAGII LCVILLALLS SGKNGSVSFK WFRMAFGGWL LSCMSLGCQY LSSRVEPNGY 180 LLYTVAYFAS ALVILLVITV VRFRSGPNRT EILAGLPSGI LASLETPLSM FLVTQFPAFV 240 LYPVSVTLPM ILVLLIGRIF LKEHMNRTCW IACIIGVLGM VAINL 285
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUX6-F1-model_v4 | 1 | 285 | 4 | 280 | 0.8204 |
0.8658 |
| AF-Q9I3T3-F1-model_v4 | 1 | 285 | 6 | 293 | 0.8191 |
0.8675 |
| AF-A0A0H3GYQ5-F1-model_v4 | 2 | 285 | 1 | 286 | 0.8185 |
0.8636 |
| AF-A0A132P9I3-F1-model_v4 | 2 | 285 | 1 | 279 | 0.8161 |
0.8561 |
| AF-Q56072-F1-model_v4 | 1 | 285 | 2 | 287 | 0.8114 |
0.8538 |
| AF-P31125-F1-model_v4 | 1 | 285 | 2 | 287 | 0.8086 |
0.8514 |
| AF-A0A0H3GPN1-F1-model_v4 | 1 | 285 | 2 | 287 | 0.8085 |
0.8514 |
| AF-Q9HV25-F1-model_v4 | 1 | 285 | 7 | 286 | 0.8067 |
0.8589 |
| AF-Q9HXB6-F1-model_v4 | 2 | 285 | 1 | 286 | 0.8048 |
0.8546 |
| AF-Q24JQ0-F1-model_v4 | 1 | 285 | 3 | 290 | 0.8029 |
0.8432 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 285 | 447 | 766 | 0.5596 |
0.8307 |
| WJH36882.1 | GH36 | 1 | 285 | 375 | 662 | 0.5394 |
0.7706 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 285 | 98 | 388 | 0.5268 |
0.82 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3P6AF83 | GH28 | 1 | 285 | 447 | 766 | 0.5596 |
0.8307 |
| WJH36882.1 | GH36 | 1 | 285 | 375 | 662 | 0.5394 |
0.7706 |
| A0A4D6KI88 | GH1 | 1 | 285 | 98 | 388 | 0.5268 |
0.82 |
| Q5B3N6 | GT25 | 1 | 285 | 516 | 797 | 0.519 |
0.781 |
| A0A7H8KSK8 | GT51 | 1 | 285 | 816 | 1110 | 0.4598 |
0.7414 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5y79-assembly1.cif.gz_B | 1 | 285 | 8 | 299 | 0.7667 |
0.8205 |
| 7paf-assembly1.cif.gz_D | 3 | 285 | 1 | 278 | 0.7345 |
0.7764 |
| 5i20-assembly4.cif.gz_D | 1 | 285 | 1 | 280 | 0.7046 |
0.7467 |
| 5i20-assembly2.cif.gz_B | 1 | 285 | 3 | 277 | 0.7037 |
0.7541 |
| 5i20-assembly1.cif.gz_A | 1 | 285 | 1 | 282 | 0.6953 |
0.7402 |
| 5i20-assembly5.cif.gz_E | 1 | 285 | 1 | 284 | 0.693 |
0.7375 |
| 5ogk-assembly1.cif.gz_A | 1 | 285 | 1 | 284 | 0.6804 |
0.7269 |
| 6qsk-assembly1.cif.gz_A | 1 | 285 | 1 | 284 | 0.6769 |
0.724 |
| 5oge-assembly1.cif.gz_E | 1 | 285 | 2 | 296 | 0.6765 |
0.7316 |
| 5oge-assembly2.cif.gz_B | 1 | 285 | 2 | 291 | 0.6744 |
0.7263 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P60951-F1-model_v4 | 2 | 285 | 1 | 283 | 0.8276 |
0.86 |
| AF-Q92F94-F1-model_v4 | 1 | 285 | 1 | 279 | 0.8266 |
0.8676 |
| AF-Q8YAF7-F1-model_v4 | 1 | 285 | 1 | 279 | 0.8261 |
0.8673 |
| AF-A0A0H2ZHZ4-F1-model_v4 | 1 | 285 | 5 | 280 | 0.8255 |
0.8733 |
| AF-P29370-F1-model_v4 | 1 | 285 | 4 | 276 | 0.8208 |
0.88 |
| AF-Q9HUX6-F1-model_v4 | 1 | 285 | 4 | 280 | 0.8204 |
0.8658 |
| AF-Q837B5-F1-model_v4 | 2 | 285 | 1 | 281 | 0.8162 |
0.8544 |
| AF-Q92F91-F1-model_v4 | 1 | 285 | 1 | 282 | 0.816 |
0.8511 |
| AF-Q8YAF3-F1-model_v4 | 1 | 285 | 1 | 282 | 0.8148 |
0.8501 |
| AF-Q81VJ7-F1-model_v4 | 1 | 285 | 1 | 277 | 0.8125 |
0.8573 |