PROTEIN: Rep_3396_c_29_8
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Protein File & Metadata
Source:
Rep_3396_c_29_8.pdb
Genome ID:
Protein ID:
Rep_3396_c_29_8
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Protein Sequence
MNQLILLGGN RDDPMADFLF KNLSRRFCVT CCTGERVLMR GSGRELLFLF YPGLRAAEGK 60 RGLYLACAGR PLPEGLFLPE GAAVIVSSEE EGQLRELSRL GARAVTCGLS GKDTVTFSSR 120 EEGRAVISLM REVTGPAGIR VEPMDLPVNI PKGVGDYPIL ACGAALMLLG GVSETGEEKF 180 FQT 183
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F6L9-F1-model_v4 | 1 | 183 | 105 | 311 | 0.5191 |
0.7599 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4P7SJK7-F1-model_v4 | GT28 | 1 | 183 | 528 | 740 | 0.4308 |
0.7329 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P7SJK7 | GT28 | 1 | 183 | 528 | 740 | 0.4308 |
0.7329 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8ewa-assembly1.cif.gz_B | 1 | 183 | 103 | 298 | 0.5961 |
0.7615 |
| 8egn-assembly1.cif.gz_B | 1 | 183 | 104 | 296 | 0.5938 |
0.755 |
| 8ewa-assembly1.cif.gz_A | 1 | 183 | 103 | 296 | 0.5915 |
0.755 |
| 8dof-assembly1.cif.gz_A-2 | 1 | 183 | 98 | 301 | 0.5899 |
0.7524 |
| 8egm-assembly1.cif.gz_F | 1 | 183 | 99 | 302 | 0.5858 |
0.7486 |
| 6x9n-assembly3.cif.gz_C | 1 | 183 | 101 | 304 | 0.5831 |
0.7471 |
| 8egn-assembly1.cif.gz_A | 1 | 183 | 106 | 307 | 0.5806 |
0.7474 |
| 6cau-assembly1.cif.gz_A | 1 | 183 | 107 | 303 | 0.5788 |
0.7428 |
| 4hv4-assembly2.cif.gz_B | 1 | 183 | 105 | 300 | 0.5033 |
0.7343 |
| 4hv4-assembly1.cif.gz_A | 1 | 183 | 101 | 304 | 0.4917 |
0.7194 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A4SV75-F1-model_v4 | 1 | 183 | 105 | 314 | 0.5214 |
0.7678 |
| AF-Q5F6L9-F1-model_v4 | 1 | 183 | 105 | 311 | 0.5191 |
0.7599 |
| AF-B7J3V1-F1-model_v4 | 1 | 183 | 105 | 312 | 0.5183 |
0.757 |
| AF-Q7W4B5-F1-model_v4 | 1 | 183 | 105 | 311 | 0.516 |
0.7553 |
| AF-Q7WFS3-F1-model_v4 | 1 | 183 | 105 | 311 | 0.5159 |
0.7554 |
| AF-Q2KVG1-F1-model_v4 | 1 | 183 | 105 | 311 | 0.5155 |
0.7546 |
| AF-A9I4V6-F1-model_v4 | 1 | 183 | 105 | 311 | 0.5147 |
0.7535 |
| AF-Q7NQ00-F1-model_v4 | 1 | 183 | 105 | 309 | 0.5127 |
0.7486 |
| AF-Q46WZ5-F1-model_v4 | 1 | 183 | 105 | 311 | 0.5126 |
0.7533 |
| AF-Q21SX0-F1-model_v4 | 1 | 183 | 105 | 310 | 0.5116 |
0.753 |