PROTEIN: Rep_3396_c_24_18
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Protein File & Metadata
Source:
Rep_3396_c_24_18.pdb
Genome ID:
Protein ID:
Rep_3396_c_24_18
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Protein Sequence
MYSYELHCHT AGVSKCASAT PEEGAAAYLA AGYAGVVVTN HFNHYTFEDV LPEDASWDQV 60 VDFYLEGYRR FKKAAEGKLE VFLGMEIRFD ENGNDYLVFG VTEEFLRSHP EIINMTAGEF 120 SALSRQEGLL FYQAHPFRNG MTVTDPKLLD GIESYNGHLN HDSRNDIAMI WAEKHHLLQS 180 SGSDYHDPGR EARGGILVPE RIRTQEELLK VLRSQPMLIR K 221
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57860-F1-model_v4 | 2 | 221 | 1 | 213 | 0.6855 |
0.7542 |
| AF-P44176-F1-model_v4 | 1 | 214 | 2 | 274 | 0.6198 |
0.7241 |
| AF-P77766-F1-model_v4 | 1 | 217 | 7 | 286 | 0.6062 |
0.7189 |
| AF-Q32GS4-F1-model_v4 | 1 | 213 | 7 | 285 | 0.6042 |
0.7285 |
| AF-A0A0D2GG65-F1-model_v4 | 1 | 221 | 178 | 387 | 0.5607 |
0.8169 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B3DWM3-F1-model_v4 | GT28 | 1 | 221 | 399 | 625 | 0.5193 |
0.7831 |
| AF-A0A0C1UQM4-F1-model_v4 | GT28 | 1 | 221 | 399 | 625 | 0.5179 |
0.7811 |
| AF-A0A5B8UDB4-F1-model_v4 | GT4 | 1 | 221 | 389 | 585 | 0.5137 |
0.8534 |
| AF-D3FAF3-F1-model_v4 | GT4 | 1 | 221 | 407 | 601 | 0.5114 |
0.8637 |
| WCB91666.1 | GT4 | 1 | 221 | 426 | 622 | 0.5077 |
0.8568 |
| AF-D0LZR8-F1-model_v4 | GT4 | 1 | 221 | 7 | 245 | 0.5014 |
0.7973 |
| AF-W0DIC7-F1-model_v4 | GT4 | 1 | 221 | 5 | 242 | 0.4995 |
0.7791 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCB91666.1 | GT4 | 1 | 221 | 426 | 622 | 0.5077 |
0.8568 |
| B4U8C3 | GT4 | 1 | 221 | 1 | 235 | 0.5032 |
0.7915 |
| D0LZR8 | GT4 | 1 | 221 | 7 | 245 | 0.5014 |
0.7973 |
| A0A1H2ECD2 | GT28 | 1 | 221 | 483 | 709 | 0.5011 |
0.7839 |
| E4TFF8 | GT4 | 1 | 221 | 1 | 239 | 0.4982 |
0.7852 |
| A0A7G9NYI3 | GT4 | 1 | 221 | 9 | 246 | 0.4958 |
0.7921 |
| A0A3R5UZG1 | GT4 | 1 | 221 | 9 | 247 | 0.4944 |
0.7867 |
| I4CEZ6 | GT4 | 2 | 221 | 1 | 236 | 0.4922 |
0.7902 |
| A0A7M2WZ79 | GT4 | 1 | 221 | 30 | 268 | 0.4852 |
0.7849 |
| F8AAV1 | GT4 | 1 | 221 | 5 | 242 | 0.4674 |
0.7353 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2anu-assembly1.cif.gz_A | 1 | 221 | 3 | 221 | 0.7456 |
0.7852 |
| 2anu-assembly1.cif.gz_C | 1 | 221 | 3 | 220 | 0.7454 |
0.7854 |
| 2anu-assembly1.cif.gz_B | 1 | 221 | 3 | 218 | 0.7448 |
0.7897 |
| 2anu-assembly2.cif.gz_F | 1 | 221 | 3 | 221 | 0.7448 |
0.7844 |
| 7rty-assembly2.cif.gz_B | 1 | 221 | 3 | 225 | 0.724 |
0.7832 |
| 7ug9-assembly1.cif.gz_A | 3 | 216 | 1 | 206 | 0.6912 |
0.7408 |
| 3e38-assembly1.cif.gz_B | 1 | 221 | 18 | 239 | 0.6403 |
0.793 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57860-F1-model_v4 | 2 | 221 | 1 | 213 | 0.6855 |
0.7542 |
| AF-P44176-F1-model_v4 | 1 | 214 | 2 | 274 | 0.6198 |
0.7241 |
| AF-P77766-F1-model_v4 | 1 | 217 | 7 | 286 | 0.6062 |
0.7189 |
| AF-Q8YEK2-F1-model_v4 | 1 | 208 | 2 | 258 | 0.419 |
0.7448 |
| AF-Q92ZJ6-F1-model_v4 | 1 | 208 | 1 | 250 | 0.4184 |
0.745 |
| AF-Q8G381-F1-model_v4 | 1 | 207 | 2 | 257 | 0.418 |
0.7476 |