PROTEIN: Rep_3372_c_86_13
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Protein File & Metadata
Source:
Rep_3372_c_86_13.pdb
Genome ID:
Protein ID:
Rep_3372_c_86_13
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Protein Sequence
MKRQFKLDNA ALAYTASRTR NWSATYRVGA LLAEEVHPQS LKLAARNLRS RFPTFYVQLR 60 SGFRWDYLES VPDTEIVLPE HGPACQPLTI GKGDKPMFRI LYGERRISVE LFHCITDANG 120 AMVYLKTLLA EYLRIRHNAQ IPCTDGVLDP RQAPQAGEFE DAYKRIATRE HGLTRREPSA 180 YQYQAPVVDD NLYLISGLIP VDQIKAVTKA LGVTVNDYLV SAYIYAFYLN MDPGSRTNRE 240 IRINVPVNLR PLFHTNTLRN FAMYYNIGLP ARAEAYTFPE ILTYISTHLR AGFQKESLRR 300 SVCKNVADET MFLAQVAPAF LKRPFINAGF HLFGEQKYTS PFSNLGVIKV PAAMEPYIER 360 FDFVLGRTVK NKIYATAVSF QNTLNVTFSS VSPAAQIQTT FFQFLRKQGI PVQISYPLEM 420 GSRPETPAHH GSSTARRPAM VRA 443
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLD1-F1-model_v4 | 1 | 410 | 1 | 429 | 0.7799 |
0.8432 |
| AF-K0ERT7-F1-model_v4 | 1 | 410 | 3 | 437 | 0.7774 |
0.8469 |
| AF-Q9HYR6-F1-model_v4 | 1 | 411 | 1 | 433 | 0.7644 |
0.8351 |
| AF-K0F199-F1-model_v4 | 1 | 409 | 1 | 414 | 0.7557 |
0.8063 |
| AF-Q09710-F1-model_v4 | 1 | 411 | 4 | 446 | 0.7521 |
0.8274 |
| AF-K0EJR8-F1-model_v4 | 3 | 411 | 1 | 410 | 0.7468 |
0.7977 |
| AF-A0A1D8PHJ5-F1-model_v4 | 1 | 411 | 1 | 418 | 0.7398 |
0.793 |
| AF-P53304-F1-model_v4 | 3 | 413 | 1 | 468 | 0.7338 |
0.8247 |
| AF-A0A1C1CHV6-F1-model_v4 | 1 | 411 | 4 | 475 | 0.7325 |
0.8288 |
| AF-K0EPI1-F1-model_v4 | 1 | 410 | 3 | 417 | 0.7312 |
0.7804 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A4FHR6-F1-model_v4 | GT28 | 1 | 410 | 374 | 795 | 0.587 |
0.8189 |
| AF-A0A7R7HY87-F1-model_v4 | GT28 | 1 | 410 | 80 | 767 | 0.5817 |
0.7984 |
| AF-W5WA33-F1-model_v4 | GT28 | 1 | 411 | 374 | 778 | 0.5805 |
0.8112 |
| A0A1G6KFY6 | GT28 | 1 | 410 | 405 | 812 | 0.5796 |
0.8158 |
| AF-A0A6H1REK1-F1-model_v4 | GT28 | 1 | 411 | 372 | 789 | 0.5766 |
0.7972 |
| AF-A0A223RRK0-F1-model_v4 | GT28 | 1 | 411 | 378 | 814 | 0.5764 |
0.8105 |
| AF-A0A810L0P6-F1-model_v4 | GT28 | 1 | 410 | 133 | 817 | 0.566 |
0.7936 |
| AF-A0A1H1TJ86-F1-model_v4 | GT28 | 1 | 411 | 162 | 838 | 0.5582 |
0.7906 |
| AVT29363.1 | GT28 | 1 | 410 | 365 | 838 | 0.5564 |
0.79 |
| AF-A0A1A8ZH35-F1-model_v4 | GT28 | 1 | 410 | 413 | 839 | 0.5559 |
0.7989 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1G6KFY6 | GT28 | 1 | 410 | 405 | 812 | 0.5796 |
0.8158 |
| A0A223RRK0 | GT28 | 1 | 411 | 378 | 814 | 0.5764 |
0.8105 |
| A0A810L0P6 | GT28 | 1 | 410 | 133 | 817 | 0.566 |
0.7936 |
| A0A1H1TJ86 | GT28 | 1 | 411 | 162 | 838 | 0.5582 |
0.7906 |
| AVT29363.1 | GT28 | 1 | 410 | 365 | 838 | 0.5564 |
0.79 |
| A0A7W9KMN1 | GT28 | 1 | 410 | 372 | 756 | 0.5545 |
0.8018 |
| A0A1C4XH88 | GT28 | 1 | 410 | 424 | 854 | 0.5519 |
0.7961 |
| A0A9Q8R8L9 | GT1 | 1 | 415 | 453 | 911 | 0.5499 |
0.7891 |
| A0A2K8LSN4 | GT28 | 1 | 408 | 369 | 947 | 0.5371 |
0.7936 |
| A0A6M7YQH5 | PL1_4 | 1 | 409 | 391 | 868 | 0.534 |
0.7645 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1q9j-assembly2.cif.gz_B | 1 | 410 | 1 | 396 | 0.7215 |
0.7825 |
| 1q9j-assembly1.cif.gz_A | 1 | 410 | 2 | 385 | 0.7172 |
0.7891 |
| 5du9-assembly2.cif.gz_B | 2 | 410 | 1 | 418 | 0.7076 |
0.7699 |
| 5du9-assembly1.cif.gz_A | 2 | 410 | 1 | 414 | 0.7065 |
0.7676 |
| 4jn5-assembly2.cif.gz_B | 1 | 410 | 1 | 413 | 0.6993 |
0.757 |
| 2zba-assembly2.cif.gz_B | 3 | 416 | 1 | 430 | 0.6984 |
0.7542 |
| 2zba-assembly1.cif.gz_A | 1 | 416 | 1 | 435 | 0.6982 |
0.7546 |
| 4jn5-assembly1.cif.gz_A | 1 | 410 | 1 | 422 | 0.6979 |
0.7621 |
| 2zba-assembly3.cif.gz_C | 2 | 416 | 1 | 429 | 0.6974 |
0.7505 |
| 5dua-assembly1.cif.gz_B | 1 | 410 | 1 | 425 | 0.6967 |
0.7632 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLD1-F1-model_v4 | 1 | 410 | 1 | 429 | 0.7799 |
0.8432 |
| AF-P9WLD0-F1-model_v4 | 1 | 410 | 1 | 429 | 0.7778 |
0.8413 |
| AF-Q09710-F1-model_v4 | 1 | 411 | 4 | 446 | 0.7521 |
0.8274 |
| AF-A3Q0G0-F1-model_v4 | 1 | 411 | 4 | 407 | 0.7369 |
0.7926 |
| AF-A1UGV8-F1-model_v4 | 1 | 410 | 5 | 406 | 0.7365 |
0.7964 |
| AF-Q1B849-F1-model_v4 | 1 | 410 | 5 | 406 | 0.7361 |
0.7959 |
| AF-A1T9S1-F1-model_v4 | 1 | 411 | 4 | 411 | 0.7348 |
0.7884 |
| AF-P53304-F1-model_v4 | 3 | 413 | 1 | 468 | 0.7338 |
0.8247 |
| AF-Q4WYN5-F1-model_v4 | 5 | 412 | 1 | 462 | 0.7324 |
0.823 |
| AF-A0PQ31-F1-model_v4 | 1 | 410 | 2 | 407 | 0.7249 |
0.7802 |