PROTEIN: Rep_3372_c_74_17
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Protein File & Metadata
Source:
Rep_3372_c_74_17.pdb
Genome ID:
Protein ID:
Rep_3372_c_74_17
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Protein Sequence
MDSMASENQA RAGRYRELLS ASPLLYAPAQ QIPAGAGADA AAIQYVLGPL LAEFVRWVLL 60 SAWQSGQKRL YFLARDGYAM YEAAKICCGA FGLPVDCRYL SCSRYALRQP LFHTDHRWAL 120 ETICTGGRAV TPERVLARAG LPEPERRIVL EQLNLPYGPN QALPPAALAE LRRALSRCNG 180 FLDRMDTHAA AALPALIQYL TQEGIVSGRA DAVVDSGWTG TIQETLARVC TYAGRKHPLA 240 GYYFGLYGLP RHVERARYRC YYFAPEGDIG RKAHFSSSLF EAVFTAPHGM TVGYRQTAGR 300 YVPIYTGISE QALHRSRQIL PQLIAFIRCF AAATDRTDFI HTPFDANRQI LSRLIRLFMC 360 TPTRAEAAFF GSIPFSDDVV AAGYPPLAAR LNARELRAWR LLRRHHLGGA LPPRESPWYP 420 GSAVLYGRER LRNLSGYTRY QYARHLYNTC LYRKEHRP 458
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 16 | 435 | 207 | 631 | 0.6459 |
0.8201 |
| AF-Q0P8I2-F1-model_v4 | 1 | 446 | 59 | 976 | 0.4744 |
0.6755 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 17 | 451 | 638 | 1091 | 0.5781 |
0.8572 |
| A0A974WXG9 | GT4 | 2 | 440 | 190 | 1075 | 0.5744 |
0.8463 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 17 | 450 | 620 | 1067 | 0.5743 |
0.8478 |
| A0A1I7GMF6 | GT2 | 17 | 447 | 636 | 1083 | 0.5737 |
0.8559 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 443 | 1 | 403 | 0.5587 |
0.7539 |
| A0A9J7AXY3 | GT2 | 3 | 450 | 3 | 400 | 0.5506 |
0.7864 |
| V4JBH5 | GT2 | 1 | 444 | 1 | 396 | 0.5445 |
0.792 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 32 | 443 | 7 | 405 | 0.541 |
0.793 |
| QRK05458.1 | GT4 | 18 | 457 | 249 | 991 | 0.5378 |
0.8075 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 444 | 131 | 970 | 0.5329 |
0.7629 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 2 | 440 | 190 | 1075 | 0.5744 |
0.8463 |
| A0A2I6S8V6 | GT2 | 17 | 450 | 620 | 1067 | 0.5743 |
0.8478 |
| A0A1I7GMF6 | GT2 | 17 | 447 | 636 | 1083 | 0.5737 |
0.8559 |
| A0A0U5F758 | GT2 | 1 | 443 | 1 | 403 | 0.5587 |
0.7539 |
| A0A9J7AXY3 | GT2 | 3 | 450 | 3 | 400 | 0.5506 |
0.7864 |
| V4JBH5 | GT2 | 1 | 444 | 1 | 396 | 0.5445 |
0.792 |
| A0A0H3KC95 | GT2 | 32 | 443 | 7 | 405 | 0.541 |
0.793 |
| QRK05458.1 | GT4 | 18 | 457 | 249 | 991 | 0.5378 |
0.8075 |
| U5MZQ8 | GT2 | 1 | 441 | 131 | 966 | 0.5307 |
0.7651 |
| M4S1R1 | GT4 | 18 | 443 | 219 | 723 | 0.5267 |
0.7853 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 20 | 373 | 241 | 591 | 0.5761 |
0.8401 |
| 8a0m-assembly1.cif.gz_B | 10 | 439 | 458 | 876 | 0.5342 |
0.7891 |
| 8a0m-assembly2.cif.gz_C | 10 | 439 | 592 | 1024 | 0.5296 |
0.797 |
| 8a0c-assembly1.cif.gz_A | 10 | 439 | 596 | 1028 | 0.5289 |
0.7973 |
| 8a0m-assembly1.cif.gz_A | 10 | 439 | 591 | 1023 | 0.5285 |
0.7953 |
| 8a0c-assembly1.cif.gz_B | 10 | 439 | 596 | 1025 | 0.5222 |
0.7866 |
| 8a0m-assembly2.cif.gz_D | 10 | 439 | 487 | 887 | 0.5047 |
0.7778 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.