PROTEIN: Rep_3372_c_20_9
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Protein File & Metadata
Source:
Rep_3372_c_20_9.pdb
Genome ID:
Protein ID:
Rep_3372_c_20_9
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Protein Sequence
MEKQQYLFSF ARYRRSERTA ESLFPLEREL SLPELKADLR RQVEKSGGIR NVCTIRMLKN 60 IPYRAGFGIQ IRIPDWSREH YVFAPAALYN GNRFPSVERS YPPAYTARER ADSSAETFIT 120 DVPRLPENGG RMQLNTGDLA TPCIGYYDPR GKTGYLLFCG QGNSLGNLGL TFQEDLKKGE 180 AVLTLSTPCV RQKKYAMCTT QARSDDRGAL LRRGARVVLA WEEIAFPCES RTAFLRAFFR 240 LRIRPGVRRT HPDSVPWSAA YRIIENKYNA RNWVEQPGFY KSSEATSGHC RQWQTGWVGG 300 TMNTLPGLIV GSEQTQERSR RTLDFVFRSL QAPSGFLYGI YCDGRPYGDD FDDPANADIV 360 MSRKNADALY FIVRHLLWLK SRRARIPDLW LTGCKKLADA FVSFYQTWGE LDQLIDIGAN 420 RPYVHGTSAA GLAPAGLALC ARFFGEDSYR TCAAGIAEQL YRTGVVKGYT TGGPGEILGC 480 PDSESAFALL ESFTVLYEET GEERWLRYAE DAAALSASWC VSYDYRYAPD TQFARRGVAT 540 TGAVWANVQN KHAAPGICTL SGASLFRLYR ATGEVRYLEL CRDIAHNITQ YLSTRENPIY 600 SSYVWGGPAH LQKRLNARAA ALLYRRSGAQ AALFNAPGRM NERVNLSDWE GTNNVGEVPH 660 GSCWCEVSAM LTYLEIPAAY IQPDTGFCFA LDHLICRVEA RTERGMTVRL ENPTAYDADY 720 RLLVEDSAAC ANPLGDPCLW DFYTVHLPAH GAQTLTFERR IPHA 764
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7Q602-F1-model_v4 | 1 | 763 | 48 | 848 | 0.6195 |
0.6944 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJK45749.1 | GH0 | 1 | 763 | 34 | 773 | 0.9041 |
0.9459 |
| A0A268K8D9 | GH182 | 1 | 694 | 4 | 673 | 0.8102 |
0.8713 |
| WHP16390.1 | GH182 | 1 | 693 | 8 | 673 | 0.8051 |
0.8715 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 1 | 741 | 13 | 657 | 0.7947 |
0.8771 |
| A0A255SPN4 | GH182 | 1 | 764 | 18 | 666 | 0.7936 |
0.8769 |
| AF-A0A448L4J4-F1-model_v4 | GH182 | 1 | 741 | 20 | 664 | 0.7929 |
0.88 |
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 1 | 764 | 12 | 666 | 0.7925 |
0.8681 |
| AF-D5EUP3-F1-model_v4 | GH182 | 1 | 764 | 18 | 669 | 0.7914 |
0.8728 |
| AF-F0SA38-F1-model_v4 | GH182 | 1 | 764 | 18 | 671 | 0.7899 |
0.8697 |
| AF-A0A6G7X1A6-F1-model_v4 | GH182 | 1 | 743 | 20 | 672 | 0.7881 |
0.87 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A268K8D9 | GH182 | 1 | 694 | 4 | 673 | 0.8102 |
0.8713 |
| WHP16390.1 | GH182 | 1 | 693 | 8 | 673 | 0.8051 |
0.8715 |
| A0A255SPN4 | GH182 | 1 | 764 | 18 | 666 | 0.7936 |
0.8769 |
| A0A9E8YN59 | GH182 | 2 | 741 | 17 | 666 | 0.787 |
0.8699 |
| UJH67547.1 | GH182 | 1 | 764 | 27 | 673 | 0.7827 |
0.8723 |
| A0A139L1L8 | GH182 | 1 | 764 | 47 | 703 | 0.7701 |
0.8641 |
| A0A6I6K1P7 | GH182 | 1 | 696 | 33 | 678 | 0.7624 |
0.854 |
| A0A1U9NH28 | GH182 | 1 | 694 | 39 | 681 | 0.7559 |
0.8523 |
| A0A2S0VPZ6 | GH182 | 1 | 761 | 46 | 721 | 0.7531 |
0.8323 |
| WJH33832.1 | GH182 | 164 | 764 | 1 | 523 | 0.6478 |
0.7904 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.