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PROTEIN: Rep_3366_c_6_98

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Protein File & Metadata
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Source:
Rep_3366_c_6_98.pdb
Genome ID:
Rep_3366
Protein ID:
Rep_3366_c_6_98

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSKMKRILSA   AMAAALALSA   AACTNSGSSS   ASGTQGGDSS   GTSSTVSSGV   ELTGEINKYG 60
WDVPKETLKF   SYFYADDDTL   GQEEENERMA   QVASVLKDEF   NVEIERIVYK   QDPTERLNLM 120
LAGDEYPDVI   SGMPDAMAET   FIDQGRAQEL   TPYLEQYGQN   IIDGFGDYLN   LLKDDEGKLY 180
KLAHSWGHTT   DVMGRDFAIR   YDMLQEAGLP   MYDSFESYYQ   TVKKLVELNP   TNEAGEKTYG 240
ITAFSEKGEE   FYKTPLAYLG   LYGVSGGTNT   SGGSITHYYK   ENDDGTITYW   VDTEEGLKVA 300
KYINQFWRDG   LIDPDFQTKD   YDSALAFMSN   ERVVGNIGTW   WHSYVGGHQI   WQTTEDDWTI 360
DKRMQCVTFE   ESDATPALIS   DNFIRTTRCI   ITDKCQNPEG   VMLYWNWEET   PKGVAFTTMG 420
PEGEDRPWSI   DEDDNCKMND   WYWYGKEGDT   SFMWGNWEED   MGNFNYWMMA   PGYTPENRKD 480
NPGEGWASPV   VQVNAWDLIP   NYEEMDESKL   EAGQIVNKLN   AETSKAYLWD   QTLWTISFPA 540
DSPEKIINQD   VADHLASAWV   KVITANTEEE   CVQLFEQMGK   DLHAIGLDDL   VAYQQESLNK 600
NKAKFEGTAA   AE 612
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 45 609 28 502 0.7035 0.8264
AF-P76042-F1-model_v4 52 593 22 430 0.5897 0.7349
AF-A0A133CDW9-F1-model_v4 66 596 42 444 0.5845 0.7496
AF-Q8DNU2-F1-model_v4 40 596 20 445 0.5834 0.7149
AF-K0F002-F1-model_v4 37 593 34 439 0.5797 0.7342
AF-Q8DNU8-F1-model_v4 65 596 37 440 0.5793 0.7402
AF-A0A0H3GHK7-F1-model_v4 65 612 19 436 0.5793 0.7139
AF-A0A132ZDH4-F1-model_v4 64 587 27 427 0.5786 0.732
AF-A0A133CPC5-F1-model_v4 53 593 30 423 0.5775 0.7382
AF-K0EWS9-F1-model_v4 46 596 43 463 0.5768 0.7261
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 41 608 32 506 0.6889 0.8135
AF-A0A7U1BNH7-F1-model_v4 GH10 66 600 27 744 0.4437 0.5575
AF-A0A1B0VLS2-F1-model_v4 CBM0 1 609 442 967 0.4296 0.6062
A0A242CSU4 CBM35 1 607 409 996 0.4214 0.5455
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 41 608 32 506 0.6889 0.8135
A0A1Q2TKJ3 GH49 24 594 128 797 0.4583 0.5601
A0A9Q8PNJ5 GH4 11 597 98 866 0.4456 0.5481
A0A7U1BNH7 GH10 66 600 27 744 0.4437 0.5575
A0A242CSU4 CBM35 1 607 409 996 0.4214 0.5455
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 65 606 1 494 0.7383 0.8302
6fth-assembly1.cif.gz_A 65 608 1 496 0.7318 0.8217
3omb-assembly1.cif.gz_A 48 603 2 503 0.7299 0.8156
5g62-assembly2.cif.gz_B 67 607 1 491 0.7217 0.8149
4tqu-assembly1.cif.gz_Q 55 608 1 491 0.7143 0.8086
5xs8-assembly1.cif.gz_A 67 598 1 474 0.7137 0.819
5h6u-assembly1.cif.gz_A 61 608 1 487 0.7124 0.8083
6jhx-assembly2.cif.gz_B 55 603 1 483 0.7103 0.8085
3vlw-assembly2.cif.gz_B 55 606 1 489 0.7094 0.8042
5suo-assembly1.cif.gz_A 67 608 1 451 0.6707 0.7859
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 45 606 33 538 0.7321 0.8388
AF-P37966-F1-model_v4 47 602 29 502 0.7149 0.8411
AF-Q795R2-F1-model_v4 45 603 30 498 0.682 0.8087
AF-Q8FVS7-F1-model_v4 66 593 23 411 0.6076 0.7746
AF-Q578M8-F1-model_v4 66 593 23 411 0.6062 0.7728
AF-Q2YKZ9-F1-model_v4 66 593 23 411 0.6049 0.7712
AF-P76042-F1-model_v4 52 593 22 430 0.5897 0.7349
AF-Q7LYW7-F1-model_v4 53 596 36 450 0.5836 0.7347
AF-Q53684-F1-model_v4 43 593 19 423 0.5823 0.749
AF-Q9RUE8-F1-model_v4 65 594 18 420 0.5817 0.7278
Download Full SwissProt Results