PROTEIN: Rep_3321_c_40_4
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Protein File & Metadata
Source:
Rep_3321_c_40_4.pdb
Genome ID:
Protein ID:
Rep_3321_c_40_4
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Protein Sequence
MRNVQGLEDR WEQYRKVWRR SFRMAQILEG TPLPVDALAL TSTYVLAPAL GSFVEWVLHE 60 AVKSEKKRLY FLARDGYFPW RAALIFCEEY RLPIECRYLC CSRYSLRLPV FHLDRKAALE 120 YVCRGGIDVT MEKILRRAGL TEEERGEVLR SVSFPFAPEE ILPYAALAEI RHRLGECALF 180 LAHMDRHSRG AMPGLAGYLR QEGLLEDAAD AVVDSGWVGS MQKTLQDVLT FMGRTRRLEG 240 YYWGLYDLPS GACREEYHTY AFAPEGNLWA KVYFNNCLFE AVYTAPHGMT LSYRRKGERY 300 IPCYGHMEAG QKTFVKKIED CLLPYIRRFA KTWRGLPDER MLNGDRHVVC KLFEQFMGRP 360 SRSEAEVFGS LPFSDDVLEG KAGQLAAPLT EEELRAHHFL PKLLLMTGRK KGLIRESAWY 420 EGSAVRSGKR VRRHLHQYRL YQAARQLRKM YHFQRERERE HEGRATT 467
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 12 | 436 | 206 | 631 | 0.6458 |
0.819 |
| AF-Q0P8I2-F1-model_v4 | 1 | 444 | 67 | 975 | 0.4697 |
0.6803 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 15 | 452 | 635 | 1091 | 0.5723 |
0.8533 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 15 | 451 | 617 | 1067 | 0.5694 |
0.8455 |
| A0A1I7GMF6 | GT2 | 15 | 447 | 633 | 1083 | 0.569 |
0.8561 |
| A0A974WXG9 | GT4 | 1 | 441 | 190 | 1075 | 0.5661 |
0.8412 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 3 | 444 | 3 | 403 | 0.5538 |
0.7571 |
| A0A9J7AXY3 | GT2 | 3 | 451 | 3 | 400 | 0.5436 |
0.7854 |
| V4JBH5 | GT2 | 3 | 445 | 1 | 396 | 0.5383 |
0.7908 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 31 | 444 | 7 | 405 | 0.5358 |
0.794 |
| QRK05458.1 | GT4 | 17 | 458 | 249 | 991 | 0.5284 |
0.7998 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 445 | 131 | 970 | 0.526 |
0.7604 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 15 | 451 | 617 | 1067 | 0.5694 |
0.8455 |
| A0A1I7GMF6 | GT2 | 15 | 447 | 633 | 1083 | 0.569 |
0.8561 |
| A0A974WXG9 | GT4 | 1 | 441 | 190 | 1075 | 0.5661 |
0.8412 |
| A0A0U5F758 | GT2 | 3 | 444 | 3 | 403 | 0.5538 |
0.7571 |
| A0A9J7AXY3 | GT2 | 3 | 451 | 3 | 400 | 0.5436 |
0.7854 |
| V4JBH5 | GT2 | 3 | 445 | 1 | 396 | 0.5383 |
0.7908 |
| A0A0H3KC95 | GT2 | 31 | 444 | 7 | 405 | 0.5358 |
0.794 |
| QRK05458.1 | GT4 | 17 | 458 | 249 | 991 | 0.5284 |
0.7998 |
| U5MZQ8 | GT2 | 1 | 442 | 131 | 966 | 0.5246 |
0.7637 |
| A0A0U3BMS4 | GT111 | 1 | 414 | 105 | 927 | 0.5194 |
0.7866 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 19 | 371 | 241 | 591 | 0.5681 |
0.8365 |
| 8a0m-assembly1.cif.gz_B | 8 | 440 | 457 | 876 | 0.5355 |
0.7987 |
| 8a0m-assembly2.cif.gz_C | 8 | 440 | 591 | 1024 | 0.5302 |
0.8033 |
| 8a0c-assembly1.cif.gz_A | 8 | 440 | 595 | 1028 | 0.5296 |
0.8034 |
| 8a0m-assembly1.cif.gz_A | 8 | 440 | 590 | 1023 | 0.5291 |
0.8013 |
| 8a0c-assembly1.cif.gz_B | 8 | 440 | 595 | 1025 | 0.5225 |
0.7948 |
| 8a0m-assembly2.cif.gz_D | 9 | 440 | 487 | 887 | 0.5052 |
0.7887 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.