PROTEIN: Rep_332_c_26_18
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Protein File & Metadata
Source:
Rep_332_c_26_18.pdb
Genome ID:
Protein ID:
Rep_332_c_26_18
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Protein Sequence
MKRIRCVLSL LAAVMFLAVN AAEIDYDKLP RAINIAPQDK FHVQGVAVDM QNEVVYLSFT 60 SSLIKTDFQG NIIGSVVNMG GCHLGCLSFN PDDGTLYASC EYKSDEIGRS LRKSAGKTAA 120 AADEVNETGF YVASFNGDEI NRVGIDAEES GIMRLAFLPQ VFNDYFAGVR NKGKEVKHRF 180 GCSGIDGTAV APALRSFGGN NRLFVAYGIY GDTTRTDNDY QVILEYDIRQ IQSLSKAYSS 240 SALHRSGPEK PVNIYFVLTG NTTYGVQNLN YDRATGNLFM AVYKGKKSCW PNYNLYVIDG 300 SRKPEKRIIT GVEPEYRAKT LQLVENGRNK VTPGWNAPGG ATGLCSVGKG YFYIAKNAKN 360 KEGRQYCTVE LYRWQPETEA GLVKVE 386
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EWG9-F1-model_v4 | 7 | 386 | 4 | 371 | 0.8756 |
0.9107 |
| AF-A0A175VX91-F1-model_v4 | 29 | 376 | 34 | 309 | 0.5569 |
0.7026 |
| AF-Q8ZKD2-F1-model_v4 | 30 | 376 | 64 | 298 | 0.5461 |
0.7829 |
| AF-A0A0K0E270-F1-model_v4 | 6 | 386 | 687 | 1091 | 0.3359 |
0.5039 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q2CQH8-F1-model_v4 | CBM5 | 25 | 386 | 41 | 386 | 0.7439 |
0.9274 |
| AF-A0A1H2DBM0-F1-model_v4 | GH43_5 | 31 | 385 | 31 | 321 | 0.5861 |
0.7172 |
| AF-A0A172ZL62-F1-model_v4 | GH43_5 | 26 | 384 | 23 | 322 | 0.5858 |
0.699 |
| AF-A0A7Z2ZUF4-F1-model_v4 | GH43_5 | 27 | 384 | 27 | 313 | 0.5851 |
0.7164 |
| AF-Q65GB9-F1-model_v4 | GH43_5 | 27 | 384 | 27 | 320 | 0.585 |
0.7085 |
| AF-A0A3G8QZU6-F1-model_v4 | GH43_5 | 27 | 384 | 34 | 324 | 0.5836 |
0.7171 |
| AF-A0A1D7MKL5-F1-model_v4 | GH43_5 | 30 | 384 | 37 | 324 | 0.581 |
0.7204 |
| AF-E3ED00-F1-model_v4 | GH43_5 | 30 | 384 | 37 | 324 | 0.5809 |
0.7202 |
| AF-V5LER1-F1-model_v4 | GH43_5 | 30 | 384 | 37 | 324 | 0.5809 |
0.7202 |
| AF-A0A222WTG5-F1-model_v4 | GH43_5 | 30 | 384 | 37 | 324 | 0.5806 |
0.7199 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2CQH8 | CBM5 | 25 | 386 | 41 | 386 | 0.7439 |
0.9274 |
| UQN08350.1 | GH43_5 | 24 | 386 | 25 | 337 | 0.5854 |
0.6916 |
| A0A7Z2ZUF4 | GH43_5 | 27 | 384 | 27 | 313 | 0.5851 |
0.7164 |
| R5NFV5 | GH43_5 | 33 | 386 | 31 | 335 | 0.5735 |
0.6869 |
| A0A9E8G4M3 | GH43_5 | 26 | 385 | 55 | 367 | 0.5701 |
0.6943 |
| A0A6V7C5X1 | GH43_5 | 31 | 385 | 47 | 334 | 0.5699 |
0.7168 |
| A0A1L7FA03 | GH43_29 | 27 | 386 | 46 | 333 | 0.5693 |
0.7178 |
| WBL22297.1 | GH43_29 | 27 | 386 | 31 | 325 | 0.5638 |
0.7018 |
| A0A7D6XNF3 | GH43_3 | 27 | 386 | 36 | 328 | 0.5634 |
0.6985 |
| A0A7H8PZ90 | GH43 | 22 | 386 | 27 | 322 | 0.5625 |
0.6845 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5efv-assembly1.cif.gz_A | 7 | 386 | 1 | 426 | 0.4147 |
0.5275 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.