PROTEIN: Rep_312_c_434_3
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Protein File & Metadata
Source:
Rep_312_c_434_3.pdb
Genome ID:
Protein ID:
Rep_312_c_434_3
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Protein Sequence
MSNRRILATV LTLTVAAGTM SAHTFYCVEP DGADGKGIQC DITVEKVENR EIVHVVMRNL 60 RHTPFQPVKA GIRLGVDTYM DRYPEWNDKY FPTMMVCEPT HCYGYMQSPS GKVKAIVSDS 120 PVASWSLDYN LGYMEPEPHW FYGHRIKSLN LDLLSTQPQP DRHPRGCREL GPGESREWTL 180 QLIDIDGPDD FEKTVHYAAG LPVPMMSRTS CRPGEPIEIT IYGHNPKVKD GPRELPVRAM 240 GHDTWNFVFS QDNPGIYKLE INDGDRQTHG YVNVTRPWNE IIRTARREAL RCRQKATSHV 300 ESWYGFHTAF LAARYFPDHE PDSALNARFD MVAAAVFNPE SGRQNRYEWR IQNAFSTVGM 360 LADRYEAYGN KNDLLTAERI ADRVISDSQR ADGAFMNGQT DYSSVIYPAK SLLELADAEY 420 AASRRSRGRK YEKAAQKAID RLVALDGNFN TEGEITYEDG MVSCAALQMG AMALRCKDAD 480 KRRRYRDAML KLLEGHDCLT QLRVADGRRR GGTMRFWEAQ YDVHIQPNMI SSPHGWSAWR 540 AYATYYAWLL TGDEKWLAQT FDAAASFAAL VDFDTHRLNW AFVVDPAVNV RQIAVPDSTL 600 TADTPSYGCP HPDMYPHADY TIGERYVPMI SDWQTMVSSD NDVHEVFKFI AEAVLTNAFV 660 VERRDGSLGC YNCSASLEDG VLTVIADEPQ MTNLYISSDS DYKVKFKGEI ICIER 715
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 5 | 715 | 18 | 895 | 0.6714 |
0.7596 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 11 | 688 | 9 | 629 | 0.7521 |
0.8199 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 10 | 713 | 1 | 640 | 0.7517 |
0.8038 |
| AF-E0S376-F1-model_v4 | PL27 | 13 | 692 | 1 | 593 | 0.7436 |
0.8218 |
| A0A416I060 | PL27 | 9 | 689 | 2 | 651 | 0.7415 |
0.7879 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 10 | 672 | 12 | 663 | 0.7385 |
0.7893 |
| A0A975CYI3 | PL27 | 10 | 654 | 8 | 598 | 0.7375 |
0.8215 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 11 | 693 | 12 | 619 | 0.7371 |
0.8131 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 6 | 673 | 20 | 643 | 0.7343 |
0.8065 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 6 | 687 | 20 | 655 | 0.7336 |
0.7985 |
| AF-A0A0A7I1G9-F1-model_v4 | PL27 | 6 | 687 | 20 | 655 | 0.7296 |
0.7943 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 11 | 688 | 9 | 629 | 0.7521 |
0.8199 |
| A0A516PYA3 | PL27 | 10 | 713 | 1 | 640 | 0.7517 |
0.8038 |
| E0S376 | PL27 | 13 | 692 | 1 | 593 | 0.7436 |
0.8218 |
| A0A416I060 | PL27 | 9 | 689 | 2 | 651 | 0.7415 |
0.7879 |
| A0A2S0KVT5 | PL27 | 10 | 672 | 12 | 663 | 0.7385 |
0.7893 |
| A0A975CYI3 | PL27 | 10 | 654 | 8 | 598 | 0.7375 |
0.8215 |
| F5Y9B7 | PL27 | 11 | 693 | 12 | 619 | 0.7371 |
0.8131 |
| A0A6I5ZZU4 | PL27 | 11 | 693 | 29 | 716 | 0.7264 |
0.7708 |
| E3QS34 | PL27 | 10 | 713 | 17 | 702 | 0.7261 |
0.7604 |
| A0A174T7R5 | PL27 | 10 | 673 | 34 | 690 | 0.726 |
0.784 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 10 | 657 | 9 | 669 | 0.7294 |
0.7878 |
| 5nok-assembly1.cif.gz_A | 10 | 657 | 13 | 668 | 0.7235 |
0.7806 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.