PROTEIN: Rep_303_c_40_2
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Protein File & Metadata
Source:
Rep_303_c_40_2.pdb
Genome ID:
Protein ID:
Rep_303_c_40_2
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Detailed structural information will appear here after analysis...
Protein Sequence
MKPLLSIIIL LTASLAAYSA EHRFYADEGA GDDFSPQDVV CMIRSSIDGD VENVRVTIKN 60 NRHTPFQPVK AGILLGIDTY MDRYPDWNDK YFPTLMVCEP CHFYGYMQSP SGKIKAIASP 120 DPVASWSLDY NLGYQDPAPH WFMGHRIKSL RLDLLAAPPL PDHHPRDQWQ LMPGEERSWT 180 IKIIDIPALA DFEATVSREC DVPMLHMETT STAPGNEIRF DIYGTAPSVT VNRQPVPVKK 240 SYIGWQACFS SSTPGIYDIE VIDGNKRAHG HINVRYPWRR TMELAREAAW RYKQKATSHV 300 ESWYGFHTAF LAARYFPCDS FDSLLNKRFD TIFNELFDAV GNQKKYDWRI QNVSSTVGML 360 VDRYEAYGDK ADLMKARLLA DRFISSFQQK DGAYRTGNTV YTSVIYPAKS ILELADAEWE 420 AGLRNDARRH ERSARMAIDR LVESKGDFET EGEITYEDGM VSCSALQIGM LALRQKDNRL 480 RRHYTDEMLE ILKGHDCLTQ LRVPDGRRRG GTMRYWEAQY DIHMLPNMIS SPHGWSAWRA 540 YATYYAYLLT GDERWIKETF DAASSFASLI DPSSGRLSWA FVVDPQLHVR QIAVPDSAHT 600 SETPSYGTPH PDVYGNRKFT IGEQYVDMIS DWQTVVSSDN DVHEVFKFIA EAVLDKAYVV 660 ERTDGSLGCY NCKAVRNGNN IEVHASEPQI CRLFVNTKRK YNVKFDGEII WQ 712
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 6 | 712 | 23 | 858 | 0.6712 |
0.7616 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 7 | 687 | 9 | 629 | 0.7541 |
0.8203 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 7 | 710 | 1 | 640 | 0.7512 |
0.8017 |
| A0A416I060 | PL27 | 5 | 688 | 2 | 651 | 0.7451 |
0.7902 |
| AF-E0S376-F1-model_v4 | PL27 | 9 | 691 | 1 | 593 | 0.7442 |
0.8212 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 11 | 692 | 1 | 619 | 0.7402 |
0.8016 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 7 | 671 | 13 | 663 | 0.738 |
0.7887 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 18 | 672 | 10 | 643 | 0.7365 |
0.7952 |
| A0A975CYI3 | PL27 | 7 | 653 | 9 | 598 | 0.7363 |
0.8201 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 3 | 707 | 24 | 717 | 0.7351 |
0.7672 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 18 | 686 | 9 | 655 | 0.7332 |
0.7836 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 7 | 687 | 9 | 629 | 0.7541 |
0.8203 |
| A0A516PYA3 | PL27 | 7 | 710 | 1 | 640 | 0.7512 |
0.8017 |
| A0A416I060 | PL27 | 5 | 688 | 2 | 651 | 0.7451 |
0.7902 |
| E0S376 | PL27 | 9 | 691 | 1 | 593 | 0.7442 |
0.8212 |
| F5Y9B7 | PL27 | 11 | 692 | 1 | 619 | 0.7402 |
0.8016 |
| A0A2S0KVT5 | PL27 | 7 | 671 | 13 | 663 | 0.738 |
0.7887 |
| A0A975CYI3 | PL27 | 7 | 653 | 9 | 598 | 0.7363 |
0.8201 |
| A0A6I5ZZU4 | PL27 | 3 | 707 | 24 | 717 | 0.7351 |
0.7672 |
| E3QS34 | PL27 | 8 | 712 | 2 | 700 | 0.7306 |
0.7502 |
| A0A174T7R5 | PL27 | 6 | 672 | 35 | 690 | 0.7277 |
0.786 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 6 | 656 | 10 | 669 | 0.7301 |
0.7838 |
| 5nok-assembly1.cif.gz_A | 6 | 656 | 14 | 668 | 0.7237 |
0.7764 |
| 3h7l-assembly1.cif.gz_A | 100 | 703 | 1 | 576 | 0.5008 |
0.5648 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.